Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq109776 113 6e-20 seq92997 82.4 9e-11 >seq109776 Length=48066 Score = 113 bits (124), Expect = 6e-20 Identities = 333/506 (66%), Gaps = 13/506 (3%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 || ||||| ||| |||||| ||||| || || || || ||||||||||| |||||| Sbjct 3927 CCTTCGTCTCGGCTGATGAGCTCATTGGAAAATGTCAAGCCGGGCATGAGACCGCGCTTC 3986 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||| ||| ||||| || || || || ||||||||||||||||| || || || Sbjct 3987 TTCAGCCAAAAAATGGCCGCGAAAGAACCGGAGAAGAAGATCCCCTCAACCGCAGCAAAA 4046 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 127714 || | || ||||| ||||| || | ||| | || || ||| | ||||| Sbjct 4047 GCGATGAGGCGCTCAGCAAACGA---AGTCTTCTTGTCCGAAATCCAGCGAAGAGCCCAT 4103 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | ||| || || || ||| || | ||||| || || || || || | | ||| Sbjct 4104 TCTGCTTTGCGCTTGACACAGGGAATGGTCTCGACAGCGTCGAAAAGGTATTCACGTTCA 4163 Query 127775 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 127833 | || ||||| ||||| |||| ||||| || || || ||| ||| | | | | Sbjct 4164 GCAGGGTCTTTAATGTAAGTATCAATGAGAAGCGAGTAGGTCTCGGAGTGAATGTTCTCC 4223 Query 127834 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTTATCTGTACCTCATCGGCAA 127892 || || | ||| | ||||||| |||| || || || | || ||||||| | | Sbjct 4224 ATCAT-GATTTGAAAACCGTAGAAGCAGCGAGCCTCTGCGGCT-TGGACCTCATTCGAGA 4281 Query 127893 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 127952 | | || ||||| || || ||||| || | ||||| || || |||| || Sbjct 4282 AGCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCTGCAAAGAAAGCGAGGACAT 4341 Query 127953 ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTG 128009 ||||| | | || || ||||| | || |||||||||| | | |||||||| Sbjct 4342 GAGAGATGAAATGACGCTCGTTGTCGTTGAGGCGGTTCTTCCAGTCATGTAAATCCTTTG 4401 Query 128010 AGAGATCTACCTCCTCCGCAGTCCAA 128035 |||| || | |||||| ||||||||| Sbjct 4402 AGAGGTCCATCTCCTCTGCAGTCCAA 4427 >seq92997 Length=357 Score = 82.4 bits (90), Expect = 9e-11 Identities = 180/264 (68%), Gaps = 12/264 (5%) Strand=Plus/Minus Query 12644 GTGGACACCCAAAATCTTCTCGCGTCCGCGCACA-CTGGGTAGGGACACGGTGATCTTAC 12702 |||||| | | ||||||||||| |||| || | |||| || ||| || || || Sbjct 262 GTGGACGCGGATGATCTTCTCGCGACCGCCGACGTCCGGGTTCGG-CACCACGACCTGAC 204 Query 12703 GATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCG 12762 | || ||||| || || || || ||||| ||| || | || ||||| || || | Sbjct 203 GGTCGAAGCGGCCCGGACGCAGCAGGGCCGGGTCCAGCACGTCGGGACGGTTGGTGGCGG 144 Query 12763 CGATGACAACGATGCCCGTCTCGTTA---TCGAAGCCATCCATCTCAGTCAAGAGTTGAT 12819 |||| | | |||||| ||||| |||||||| |||||||| || ||||| | Sbjct 143 CGATCAGGATGATGCCT---TCGTTGGCCTCGAAGCCGTCCATCTCGACCAGCAGTTGGT 87 Query 12820 TGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACC 12877 ||| ||| || || || || || || || | ||| || || | ||| || ||| Sbjct 86 TGAGGGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCGCGATGGCGACC 29 Query 12878 GACGGCGTCAATTTCGTCAATGAA 12901 ||||||||| |||||||| ||||| Sbjct 28 GACGGCGTCGATTTCGTCGATGAA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612654417323160