Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_013650.1 Length=155445 Score E Sequences producing significant alignments: (Bits) Value seq108213 82.4 8e-11 seq10285 82.4 8e-11 >seq108213 Length=2622 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/146 (74%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 113818 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 113877 || ||||||||||| || | || || |||||||| ||||| || |||||| Sbjct 1576 GGGCCGGGCCGTGGTTCGGGCGCCGGTTCGCTGGTGGCCTACTCGCTGCTGATCACCGAC 1635 Query 113878 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAA-CCCGGAC-CGCCCCG 113935 |||| ||| || ||||| | ||| |||||||||||||| |||| |||| || || || Sbjct 1636 CTCGATCCGCTCCAGTACAATCTGCTGTTCGAGCGCTTCCTCAATCCCGAACGCGTGTCG 1695 Query 113936 ACTTCCCCGACATCGACGTCGACTTC 113961 | | |||||| ||||| |||||||| Sbjct 1696 A--TGCCCGACTTCGACATCGACTTC 1719 >seq10285 Length=766 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 113819 GCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGA 113878 ||| |||||||||||| || | |||| |||| |||||| ||||| ||||| | Sbjct 599 GCCAGGGCCGTGGCTCGGCGGCCAACTCGGCGGTCTGCTACGTGCTGGGCGTCACCAGCA 540 Query 113879 TCGA-CCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 113937 | || ||||| | ||||||| |||||||||||||| | || ||| ||| ||| Sbjct 539 TTGATCCCGAGCGCA-ACGACCTCTTGTTCGAGCGCTTCGTATCCCAGGAGCGCAACGAG 481 Query 113938 TTCCCCGACATCGACGTCGACTTCCAG 113964 ||||||||||||||||||||| || Sbjct 480 CCGCCCGACATCGACGTCGACTTCGAG 454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496604752343800