Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq109776 114 2e-20 >seq109776 Length=48066 Score = 114 bits (126), Expect = 2e-20 Identities = 328/499 (66%), Gaps = 18/499 (4%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 |||| ||||| || |||||| ||||| || ||||| || ||||| ||| ||||| Sbjct 3897 AACAACAGGCAGGCGAAGTCGGTGTGCATGCCTTCGTCTCGGCTGATGAGCTCATTGGAA 3956 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | ||| ||||||| || ||| || ||||||||||||||||| |||| |||| Sbjct 3957 AATGTCAAGCCGGGCATGAGACCGCGCTTCTTCAGCCAAAAAATGGCCGCGAAAGAACCG 4016 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||||||||| || || ||||| || | ||| | |||| |||| || | || Sbjct 4017 GAGAAGAAGATCCCCTCAACCGCAGCAAAAGCGATGAGGCGCTCAGCAAACGAAGTCTTC 4076 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT---CTTTGCGATGCACGGCATGCGC 160150 |||| |||| | |||||||| || || ||| || || || ||| | Sbjct 4077 TTGTCCGAAATCCAGCGAAGAGCCCATTCTGCTTTGCGCTT---GACACAGGGAATGGTC 4133 Query 160151 TCGACGGCGTTAAACAATCTGTCCTGCTCCTTCA-CA---TCCTTGATCAGAGTAGCAAT 160206 ||||| |||| || | | | | | |||| || || || || |||| |||| Sbjct 4134 TCGACAGCGTCGAAAA----GGTATTCACGTTCAGCAGGGTCTTTAATGTAAGTATCAAT 4189 Query 160207 CAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATA 160266 || |||||| | || | ||| | || || || || ||||| |||||| | Sbjct 4190 GAGAAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGAAAACCGTAGAAGCA 4249 Query 160267 TGTCGCCTC--CAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACC 160324 ||||| | | | || ||||| | | ||| | | | || || | || || Sbjct 4250 GCGAGCCTCTGCGGCT--TGGACCTCATTCGAGAAGCGCTCGACGAGGTTCTCGTTGACG 4307 Query 160325 AACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTG 160384 | || || | ||| ||||||||||| | || |||||||||||||| | ||||| | | Sbjct 4308 ATACCATCAGAGGCTGCAAAGAAAGCGAGGACATGAGAGATGAAATGACGCTCGTTGTCG 4367 Query 160385 TTGAGTCTCTTTTCCCAGT 160403 ||||| | || | ||||| Sbjct 4368 TTGAGGCGGTTCTTCCAGT 4386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794049924332560