Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq106734 118 2e-21 seq109771 116 9e-21 seq110395 107 5e-18 seq107974 93.3 1e-13 >seq106734 Length=403 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || || || |||||||| |||| || ||||| | | || | || || |||| | Sbjct 236 AGATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAAC 177 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| ||||||||||| ||||| || ||||| || || ||||| ||||||||| Sbjct 176 TGCTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATC 117 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| |||| ||||| | | ||||| |||| |||||| ||||| ||| Sbjct 116 TTGGCCTTGACGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCC 57 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || |||||||| || || Sbjct 56 GTGAGCGTCTTCACAAAGATCTG 34 >seq109771 Length=16137 Score = 116 bits (128), Expect = 9e-21 Identities = 94/111 (85%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAA-AGTCCTTCCAT 199475 |||||| ||||||||||| |||||||| |||| ||||||||| || || ||| | |||| Sbjct 11260 CAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTC-GCTAAGAGTGCGGCCAT 11202 Query 199476 CTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTC 199526 |||| ||||||||||| ||||||||||| ||||| ||||| ||| ||||| Sbjct 11201 CTTCAAGCTGCTTTCCTGCGAAGATGAGTCGCTGTTGGTCAGGAGGAATTC 11151 >seq110395 Length=10286 Score = 107 bits (118), Expect = 5e-18 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||||||||| |||||||| |||| |||||| |||| | |||| Sbjct 9748 CGAAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTARTCAGAAAGAGTC 9689 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 | ||| || || ||||||||||| |||||||| || || |||||||| ||| Sbjct 9688 CGTCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCGGGA 9638 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||||| || |||||||| |||| ||||||||| | | || Sbjct 9976 CGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 9917 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| |||||||| || || || || ||| Sbjct 9916 CGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCT 9857 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || ||| ||| |||| ||| || | | ||| || || | Sbjct 9856 TCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGG 9797 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || || || || || || || || Sbjct 9796 GTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTG 9759 Score = 100 bits (110), Expect = 7e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| ||||| ||||| ||||| |||| ||||| || | | || | || ||||||| Sbjct 10191 CAAGATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCA 10132 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 |||||| || || || || || ||||||||||| || || ||||| ||||| | Sbjct 10131 ACTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGA 10072 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| |||| |||||| | | || || || | ||||| ||||| | Sbjct 10071 TCTTAGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCC 10012 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || || || || ||||| Sbjct 10011 CAGTGAGCGTCTTGACGAATATTTG 9987 >seq107974 Length=16430 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||||||||| ||||| ||||||| ||| |||||| || ||| | || ||| Sbjct 9501 AGCACAAGGTGGAGAGTGGACTCTTTTTGGATGTTATAGTCACTCAGAGTTCGACCGTCT 9442 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || ||||||||||| || || || || || Sbjct 9441 TCGAGCTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCGGG 9401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177241916345467