Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq110395 132 5e-26 seq106734 129 7e-25 >seq110395 Length=10286 Score = 132 bits (146), Expect = 5e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| ||||| || ||||| |||| || | ||||||||| || || Sbjct 10174 TCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAACTGCTTGCCTGCAAAA 10115 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||||||||| ||| | || ||||||||| |||||| ||||| | Sbjct 10114 ATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTA 10055 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||| || || || | |||||||| || || || ||||| || || Sbjct 10054 TCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCAGTGAGCGTCTTGACG 9995 Query 46583 AAGATTTGCAT 46593 || |||||||| Sbjct 9994 AATATTTGCAT 9984 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || ||| |||| |||||||||||||||||||| Sbjct 9947 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAA 9888 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| || |||| || | || ||||| ||| ||| || ||| | ||| Sbjct 9887 GATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGGATTTTGGCCTT-AACGT 9829 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| |||||| || || | ||||| || || || || ||||| |||| Sbjct 9828 TGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTTCCCAGTAAGCGTCTTAA 9769 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 9768 CGAAGATCTGCAT 9756 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || ||||| || |||| ||||||||||| || ||||| Sbjct 9719 CTCCTTCTGGATGTTGTARTCAGAAAGAGTCCGTCCGTCCTCGAGCTGCTTTCCAGCGAA 9660 Query 46462 TATCAAGCGCTGCTGGTCGG 46481 |||| ||| |||||||||| Sbjct 9659 GATCAGGCGTTGCTGGTCGG 9640 >seq106734 Length=403 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||| ||||| || || |||||| |||| || | ||||||||||||||| Sbjct 222 CTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAACTGCTTGCCGGCGAA 163 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| || || ||||||| || | | ||||||||| ||||| ||||| ||| Sbjct 162 GATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATCTTGGCCTTGA-CGT 104 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || |||| |||||| || |||||||| ||||| || | Sbjct 103 TGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCCGTGAGCGTCTTCA 44 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 43 CAAAGATCTGCAT 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564452711558520