Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq109776 271 8e-68 seq107681 235 5e-57 seq58313 199 4e-46 seq110395 145 8e-30 seq106734 102 8e-17 >seq109776 Length=48066 Score = 271 bits (300), Expect = 8e-68 Identities = 404/564 (72%), Gaps = 13/564 (2%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| || ||| || |||||| |||| ||| ||||| | | ||||| || ||| Sbjct 3895 TGAACAACAGGCAGGCGAAGTCGGTGTGCATGCCTTCGTCTCGGCTGATGAGCTCATTGG 3954 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 || ||||||||||||||||| ||||| || || |||||||| ||||| |||||| | Sbjct 3955 AAAATGTCAAGCCGGGCATGAGACCGCGCTTCTTCAGCCAAAAAATGGCCGCGAAAGAAC 4014 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CT 133062 | || ||||||| ||||| || || || ||||| | |||||||| | |||| | || Sbjct 4015 CGGAGAAGAAGATCCCCTCAACCGCAGCAAAAGCGATGAGGCGCTCAGCAAACGAAGTCT 4074 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 |||| | | |||||||| || |||||||| || || ||||| || || || || Sbjct 4075 TCTTGTCCGAA-ATCCAGCGAAGAGCCCATTCTGCTTTGCGCTTGACACAGGGAATGGTC 4133 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTC-TTCCG-AGGAACGC--ACGTAGGTGTCGAT 133178 |||| |||| || || | | ||| | ||| | ||| | | ||| || || || Sbjct 4134 TCGACAGCGTCGAA--AAGGTA--TTCACGTTCAGCAGGGTCTTTAATGTAAGTATCAAT 4189 Query 133179 GAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCA 133238 ||| ||| || | || ||||| | ||||||||| ||||||||| ||||| ||||| Sbjct 4190 GAGAAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGAAAACCGTAGAAGCA 4249 Query 133239 CCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGAT 133298 || ||||| | | || || || | | ||| |||||||| || || ||||||||||| Sbjct 4250 GCGAGCCTCTGCGGCTTGGACCTCATTCGAGAAGCGCTCGACGAGGTTCTCGTTGACGAT 4309 Query 133299 GCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT 133358 || || ||| || || || || || || || ||||||||| |||||||||||||| Sbjct 4310 ACCATCAGAGGCTGCAAAGAAAGCGAGGACATGAGAGATGAAATGACGCTCGTTGTCGTT 4369 Query 133359 CAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAA 133415 | ||| || |||||| | ||||| || ||||||| |||||| | |||||||| Sbjct 4370 GAGGCGGTTCTTCCAGTCATGTAAATCCTTTGAGAGGTCCATCTCCTCTGCAGTCCAAAA 4429 Query 133416 CGACGCCTCGGCTTTTTTGTACAT 133439 || || ||||| || |||||||| Sbjct 4430 TGAGGCTTCGGCCTTCTTGTACAT 4453 >seq107681 Length=5071 Score = 235 bits (260), Expect = 5e-57 Identities = 595/898 (66%), Gaps = 20/898 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 || |||||| |||||| || || || ||| |||| ||||| ||||| ||||| || | Sbjct 4521 CAGCACGCCGCTTTTTTGGTAATCTCCTACCCTTTTTTCAAAGAAATTGGTTTTGCCTTG 4462 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | ||| || | | ||||||||| || ||||| | || | ||| || | ||| Sbjct 4461 TAGGGATATCATCTCCATAAAATCAAACGGGTTAGATGCGCCGTACACTTTAG----GAT 4406 Query 132711 ----CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGG-TTTCG 132765 ||| ||| | | | | ||| ||||| ||||| |||||||| ||| ||| | Sbjct 4405 AACCCAGTTCGCCTAACCAACGGTCAGCCACAAACTCAATGTATTGGCTCATCAATTTAG 4346 Query 132766 CAATTAAGTCCCAGCAGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGC 132824 | | | |||| ||| ||||||| || ||||| | ||| || || || | Sbjct 4345 CGTTCA--TCCCTATTAACGATACCGGCAATGCGTCGGTAATAAATTCTTTTTCAATCTC 4288 Query 132825 GACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAA-ATGCT 132883 ||||||||||| | |||| |||| | | |||| | | | ||| || | Sbjct 4287 TACCGCGTCGGTAATAATTTTGGTAACTGCTTCTGTGCTCAGTTTATTCTCCAGCATACC 4228 Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 || | || ||| ||||| ||||| || | || || || | || || |||||||| | Sbjct 4227 GTAA-AGCAGGCAGGCAAATTCGCAGTGTGAACCTTCATCGCGCGATATCAGTTCGTTAC 4169 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 | || ||||| |||||||| ||||| |||||||| | ||| || || | ||| || | Sbjct 4168 TAAAGGTCAATCCGGGCATCAGGCCACGTTTTTTTAACCAGAAGATAGAACAGAAGCTCC 4109 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | |||||||| | ||| || || ||||| || || |||| |||||| | || ||| | | Sbjct 4108 CTGAAAAGAAAATGCCTTCAACAGCCGCAAATGCTACCAAACGCTCGGCAAAGGTGCCGT 4049 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 ||| ||||||||||||||||| || ||||| | || || || || ||||| | Sbjct 4048 TGTTG------ATCCAGCGCAGCGCCCACTCTGCCTTCTTTTGCACACATGGAATCGTAT 3995 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGG 133183 | | |||| |||||||| ||| || ||| | | ||| || || || || Sbjct 3994 CAACCGCGTGGAACAAACGATCTTTTTCAACCGGGTCTTTAATGTAAGTATCTATCAGTA 3935 Query 133184 TCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCG 133243 || || | || ||||| | ||||||||| ||| ||||| ||||||||||| || | Sbjct 3934 GCGCGTAGGTCTCTGAGTGGATGTTCTCCATCATGATCTGAAAACCGTAAAAGCAACGGG 3875 Query 133244 CCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303 | ||| | ||||| || ||| | | | || |||||||| || || || | Sbjct 3874 CTTCGGGTAATTGCACCTCGCTCATGAAGTTCACAGCAAGGTTTTCGTTCACAATACCAT 3815 Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363 |||||||||| ||||| ||||| | |||| |||||||| |||| ||||| | Sbjct 3814 CGCTGGCGGCAAAAAAAGCCAGGATGTGCGAAATGAAATGTTTCTCGCCCGGGTTCATGG 3755 Query 133364 GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 ||||| | | ||| | |||||||| | || ||| | |||||||| || | Sbjct 3754 CTTCCCAATGTTTCAGGTCGTCCGACAGGTCAATTTCTTCGGCTGTCCAAAAGCTGGCTT 3695 Query 133424 CGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCG 133481 | | |||||| ||||| ||| || | | |||| ||| |||| || ||||| || Sbjct 3694 CCGATTTTTTATACATCTCCCAAATAGCAGGGTATTTTATAGGAAGTATTACAAAGCG 3637 >seq58313 Length=1260 Score = 199 bits (220), Expect = 4e-46 Identities = 434/633 (69%), Gaps = 24/633 (4%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| ||||| |||||| || |||||||| |||||||||||| || ||||| |||| Sbjct 631 CATTACGCCGCTTTTTTGGTAATCGCCCACGCGTTTCTCAAAAAAGTTGGTTTTGCCCTG 572 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | || || | | ||||||||| || || || | || ||| | ||| | ||| Sbjct 571 TAGCGATATCATCTCCATAAAATCAAACGGATTTGATGCACCGTA-TACTTT---CGGAT 516 Query 132711 ----CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCG 132765 ||| ||| | ||| |||||||| || ||||| || || || ||| |||| | Sbjct 515 AGCCCAGTTCGCCCAGCCATCTGTCGGCTACAAACTCAATATACTGACTCATCAGTTTGG 456 Query 132766 CAATTAAGTCCCAGCAGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGC 132824 | || | || | | ||| ||||||||||| ||| ||| ||| | || || | Sbjct 455 CG-TTCATACCTATTA-ACGATACCGGCAGCGCGTCGCTGATAAATTCCTTTTCTATCTC 398 Query 132825 GACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAA-ATGCT 132883 |||||||| | | |||| | || | | | |||| || | ||| ||||| Sbjct 397 TACCGCGTCTTTAATAATTTTGGTGACCGCCTCAGTGCTCAGCTTGTTTTCCAGCATGCT 338 Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 | ||| || ||| ||||| ||||| ||| | || || || | || || || ||||| | Sbjct 337 -GTACAGCAGGCAGGCAAATTCGCAGTGCGAACCTTCATCGCGCGATATCAGCTCGTTAC 279 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||||||||| || ||||| | ||||||||||| ||||| || || | | |||||| | Sbjct 278 TGAAAGTCAGCCCTGGCATCAATCCGCGTTTTTTCAGCCAGAAGATAGAGCAGAAACTAC 219 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 |||||||||||| ||| || || || || || ||||||| |||||| | || || || Sbjct 218 CCGAAAAGAAGATGCCTTCAACCGCAGCAAATGCCACCAAACGCTCGGC-AAAGTTGC-- 162 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTT-TG-ACGCACGGCATCGT 133121 | ||| | |||||||||||||||||||||||| |||||| || || || || || || Sbjct 161 CGTTGTT---GATCCAGCGCAGCGCCCATTCGGC--TTTCTTCTGCACACATGGTATGGT 107 Query 133122 TTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAG 133181 ||||| |||| ||||| || || || ||| | ||||| |||||||| | Sbjct 106 GTCGATAGCGTGGAACAACCGATCCTTTTCGGCCGGGTCTTTTACGTAAGTGTCGATCAA 47 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 | || |||||||||| | |||||||| Sbjct 46 CAAAGCGTAGGTTTCCGAGTGGATATTCTCCAT 14 >seq110395 Length=10286 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || || || || |||||| |||| ||||| | || Sbjct 9756 ATGCAGATCTTCGTTAAGACGCTTACTGGGAAGACGATCACCCTCGAGGTCGAATCGTCC 9815 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| |||| | ||||||| || || || || || ||| |||| || Sbjct 9816 GATACCATCGACAACG-TTAAGGCCAAAATCCAGGATAAGGAAGGCATCCCCCCCGATCA 9874 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| ||||| ||||| || |||| ||| |||||| ||||||||| Sbjct 9875 ACAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGTACCCTCTCCGACTACAA 9934 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || |||||||| || ||| | | |||||| Sbjct 9935 CATCCAGAAGGAGTCCACCCTCCATTTGGTCCTCCGTCTTCGCGGCGGC 9983 Score = 145 bits (160), Expect = 8e-30 Identities = 161/211 (76%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || |||||||| || || ||||||||| |||| |||||| | || Sbjct 9984 ATGCAAATATTCGTCAAGACGCTCACTGGGAAGACCATCACCCTCGAGGTCGAGTCGTCC 10043 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || || || ||||||| Sbjct 10044 GACACCATCGATAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCCGACCA 10102 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| || ||||| ||| |||| |||| ||||| ||| ||| ||||| Sbjct 10103 GCAGCGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGCACGCTCTCCGATTACAA 10162 Query 38423 CATCCAAAAGGAAGCGACGCTGCAT-TTGGT 38452 ||||| |||||| |||| || ||| ||||| Sbjct 10163 TATCCAGAAGGAATCGACCCTCCATCTTGGT 10193 >seq106734 Length=403 Score = 102 bits (112), Expect = 8e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || |||||||||||||| || ||||| | || || ||| | | Sbjct 31 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACAATCACGCTGGAGGTAGAGTCTTCG 90 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| || || || ||| ||||||| Sbjct 91 GACACTATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAAGGTATCCCCCCCGACCA 149 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | ||| ||||| ||| |||| |||| |||||| ||| ||||| || Sbjct 150 ACAACGTCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGGCGCACGCTCTCGGACTATAA 209 Query 38423 CATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| ||||| | || || ||| Sbjct 210 TATCCAGAAGGAGTCCACCCTTCAT 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499477553555840