Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_014663.1 Length=169947 Score E Sequences producing significant alignments: (Bits) Value seq108336 82.4 8e-11 seq108255 82.4 8e-11 seq52459 82.4 8e-11 >seq108336 Length=9354 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 79615 CTGGATTCGAACCAGCGACCTGCGGATTATCGGTCCGTTGCTCTACCAACTGAGCTAT 79672 ||||| ||||||||| ||||||||||||| | |||||| ||||||||||||||||||| Sbjct 5339 CTGGACTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCAACTGAGCTAT 5282 >seq108255 Length=12210 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 79615 CTGGATTCGAACCAGCGACCTGCGGATTATCGGTCCGTTGCTCTACCAACTGAGCTAT 79672 ||||| ||||||||| ||||||||||||| | |||||| ||||||||||||||||||| Sbjct 5290 CTGGACTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCAACTGAGCTAT 5347 >seq52459 Length=16589 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 79783 AAATTGGCTCCCCGACCACGGTTCGAACGTGGGACAAACAGAGTAACAGTCTGCTGCTCT 79842 ||| ||||||||||| || || |||||| || ||||| || |||||||| |||||| Sbjct 7733 AAACTGGCTCCCCGAGCAGGGCTCGAACCTGCGACAATTCGATTAACAGTCGAATGCTCT 7674 Query 79843 ACCAACTGAGCTATCGAGGA 79862 |||||||||||||||| ||| Sbjct 7673 ACCAACTGAGCTATCGGGGA 7654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542946646867720