Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq109776 114 2e-20 seq109896 91.5 2e-13 seq103458 89.7 6e-13 >seq109776 Length=48066 Score = 114 bits (126), Expect = 2e-20 Identities = 333/504 (66%), Gaps = 9/504 (2%) Strand=Plus/Minus Query 101816 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAA 101872 ||||||||| || ||| | || |||||||||||||| | || ||||||| | | || Sbjct 4427 TTGGACTGCAGAGGAGATGGACCTCTCAAAGGATTTACATGACTGGAAGAACCGCCTCAA 4368 Query 101873 TGAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAAT 101932 || || || | ||||| | |||| || |||||||| | || ||||| || Sbjct 4367 CGACAACGAGCGTCATTTCATCTCTCATGTCCTCGCTTTCTTTGCAGCCTCTGATGGTAT 4308 Query 101933 TGTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATC 101992 || ||||| || | ||| | ||||||| ||| || | || || | | Sbjct 4307 CGTCAACGAGAACCTCGTCGAGCGCTTCTCGAATGAGGTCCAAGCCGCAGAGGCTCGCTG 4248 Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||| | | |||| |||| ||| | | | || ||||| ||| |||| Sbjct 4247 CTTCTACGGTTTTCAAA-TCATGATGGAGAACATTCACTCCGAGACCTACTCGCTTCTCA 4189 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 102111 | || | || ||||| || |||||| | | || || || || || | || Sbjct 4188 TTGATACTTACATTAAAGACCCTGCTGAACGTGAATACCTTTTCGACGCTGTCGAGACCA 4129 Query 102112 TTCCATGTATTCAAAAG-AAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTCGCG 102169 |||| ||| | ||| | ||||| || |||||| | ||| ||| |||| | | Sbjct 4128 TTCCCTGTGT-CAAGCGCAAAGCAGAATGGGCTCTTCGCTGGATTTCGGACAA-GAAGAC 4071 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 ||| ||||||||||| ||| |||| ||||| |||||||| ||||||||||| ||||| Sbjct 4070 TTCGTTTGCTGAGCGCCTCATCGCTTTTGCTGCGGTTGAGGGGATCTTCTTCTCCGGTTC 4011 Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289 ||| || |||| |||||| |||||||| ||||||||||| || | || ||||| Sbjct 4010 TTTCGCGGCCATTTTTTGGCTGAAGAAGCGCGGTCTCATGCCCGGCTTGACATTTTCCAA 3951 Query 102290 CGAGCTTATCTCTCGTGACGAGGG 102313 ||||| ||| || ||||| || Sbjct 3950 TGAGCTCATCAGCCGAGACGAAGG 3927 >seq109896 Length=22917 Score = 91.5 bits (100), Expect = 2e-13 Identities = 328/507 (65%), Gaps = 21/507 (4%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 |||||||| ||||| || || | || || ||| |||| ||| | |||||| || Sbjct 21564 CGATCAAACCGACCAGGCCGCATAAGAGCCGGATCGAGGACATCTGGTCTGTTCGTTCCG 21505 Query 15945 GCGATGACAACAATACCTGTTTCGTTAT---CAAAACCATCCATCTCTGTCAAAAGCTGG 16001 || | || |||| | || | ||| | |||| ||||||||||| ||| ||||| Sbjct 21504 GCAAGCACGACAA--CGTGCT-CGTGAGTGCCAAACCCATCCATCTCGACCAACAGCTGA 21448 Query 16002 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTT--- 16058 || | ||| || || ||||| || || | | || | ||| | ||||| Sbjct 21447 TTGAGAGTGGACTCTCGCTCATCGTTGCCTCCGAAATTGCCGCCTTTGCCTCGCTTTTTC 21388 Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGCGAGCGAC 16114 || | |||||| ||||| || ||||||| ||| || || || || ||||| ||| Sbjct 21387 CCGATGGCATCGATCTCGTCGATGAAGATGATACAAGGCGCGTTCTTTCTCGCGGACGAG 21328 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 || || || || || | | | ||| || || || ||||||||||| || | | Sbjct 21327 ----AATAGGTCACGAACCCTCGATGAGCCTACGCCGACGAACATCTCCACGAACTCAGA 21272 Query 16175 GGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 | ||| | || ||| |||||| ||| ||| || ||| | ||| || || | || Sbjct 21271 ACCTGAAACTGAGAGGAAAGGGACACTAGCTTCGCCGGCAGTCGCTTTTGCAAGTAAGGT 21212 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTT 16292 ||| || ||||| || ||| | | | |||||| ||||| ||| | ||||| ||| Sbjct 21211 CTTGCCAGTACCGGGTGGACCGGATAAAATGGCACCGCGTGGTATCCTCGCGCCTAGCTT 21152 Query 16293 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 16352 | ||| | || |||| ||| || || | ||||| ||| | || || ||||| Sbjct 21151 C--TCGTACCGCTGGGGTTCCTTGAGGAATTTCACAAACTCCATAATCTCCTCCTTGGCC 21094 Query 16353 GCGTCAATCCCCTCAACATCGGTAAAC 16379 |||| ||||| | || ||| | ||| Sbjct 21093 TCGTCCATCCCTGCGACGTCGCTGAAC 21067 >seq103458 Length=5285 Score = 89.7 bits (98), Expect = 6e-13 Identities = 250/376 (66%), Gaps = 6/376 (2%) Strand=Plus/Plus Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 || ||||| || ||| |||| || ||||||||||| || | |||||| || ||| || Sbjct 2176 CATCGTCCCATCGGTATCGGCGTACAAGGTCTCGCTGACGCATTCATGATTCTTCG-CAT 2234 Query 112665 GCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 || ||| ||||| |||||| || | |||| | ||||| ||||| || ||||| Sbjct 2235 GCCTTTCGATTCACCCGAAGCTAAAGTGCTCAACATCCAGATATTCGAGACCATTTATCA 2294 Query 112724 CGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 112783 | ||| | || ||| | || ||||| ||| |||| || || || || | | Sbjct 2295 TGGTGCTTTGGAAGCGTCTAGCGAATTGGCTGAGAAGCATGGACCGTACGAGACTTGGGT 2354 Query 112784 GGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 112842 || |||||| ||||||||| ||| |||| |||| |||||| || || ||| Sbjct 2355 CGGAAGTCCAGC-TCACAAGGGTCAGCTGCAATATGATTTGTGGGGAGCGAAGCCCACCG 2413 Query 112843 TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 || | || ||||| | | |||| |||||| || |||| | | ||| | Sbjct 2414 ATCTGTGGGATTGGGAAGGATTGAAGGCCAAAATCAAGAGGACGGGTTTGAGAAACTCGC 2473 Query 112903 TTTTGATG-GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 112961 | | ||| || || |||||||| ||| |||| || ||| | ||| ||||| ||| Sbjct 2474 TACT-ATGCGCTCCGATGCCAACTGCCAGCACCAGTCAGATCCTAGGTTTCAATGAGTGC 2532 Query 112962 TTTGAACCCTACACGA 112977 ||||| || || |||| Sbjct 2533 TTTGAGCCATATACGA 2548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619879560304720