Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq109896 100 3e-16 seq109776 91.5 2e-13 >seq109896 Length=22917 Score = 100 bits (110), Expect = 3e-16 Identities = 329/506 (65%), Gaps = 19/506 (4%) Strand=Plus/Minus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 |||||||| ||||| || || | || || ||| |||| ||| | ||||| || Sbjct 21564 CGATCAAACCGACCAGGCCGCATAAGAGCCGGATCGAGGACATCTGGTCTGTTCGTTCCG 21505 Query 9252 GCGATGACAACAATACCTGTT--TCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGT 9309 || | || |||| | || | | | | |||| ||||||||||| ||| || || | Sbjct 21504 GCAAGCACGACAA--CGTGCTCGTGAGTGCCAAACCCATCCATCTCGACCAACAGCTGAT 21447 Query 9310 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTT---C 9366 | | ||| || || ||||| || || | | || | ||| | ||||| | Sbjct 21446 TGAGAGTGGACTCTCGCTCATCGTTGCCTCCGAAATTGCCGCCTTTGCCTCGCTTTTTCC 21387 Query 9367 CCACGGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATT 9422 | | |||||| ||||| || ||||||| ||||| || || || |||||| ||| Sbjct 21386 CGATGGCATCGATCTCGTCGATGAAGATGATACAAGGCGCGTTCTTTCTCGCGGACGAG- 21328 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 || || || |||||||| | ||| || || || ||||||||||| || | | Sbjct 21327 ---AATAGGTCACGAACCCTCGATGAGCCTACGCCGACGAACATCTCCACGAACTCAGAA 21271 Query 9483 GCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 9542 | ||| | || ||| |||||| ||| ||| || ||| | ||| || || | ||| Sbjct 21270 CCTGAAACTGAGAGGAAAGGGACACTAGCTTCGCCGGCAGTCGCTTTTGCAAGTAAGGTC 21211 Query 9543 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC 9600 || || ||||| || ||| | | | |||||| ||||| ||| | ||||| |||| Sbjct 21210 TTGCCAGTACCGGGTGGACCGGATAAAATGGCACCGCGTGGTATCCTCGCGCCTAGCTTC 21151 Query 9601 CAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGG 9660 ||| | || |||| |||||| || | ||||| ||| | || || ||||| Sbjct 21150 --TCGTACCGCTGGGGTTCCTTGAGGAATTTCACAAACTCCATAATCTCCTCCTTGGCCT 21093 Query 9661 CGTCAATCCCCTCAACATCGGTAAAC 9686 |||| ||||| | || ||| | ||| Sbjct 21092 CGTCCATCCCTGCGACGTCGCTGAAC 21067 >seq109776 Length=48066 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 || || |||||| || || ||||| || || | ||| ||||||||||| |||||| Sbjct 3927 CCTTCGTCTCGGCTGATGAGCTCATTGGAAAATGTCAAGCCGGGCATGAGACCGCGCTTC 3986 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 |||| |||| |||| || ||| || |||||||||||||| ||||| || ||||| Sbjct 3987 TTCAGCCAAAAAATGGCCGCGAAAGAACCGGAGAAGAAGATCCCCTCAACCGCAGCAAAA 4046 Query 117412 GCAAAAAGGCGCTCGGCGAAGGA 117434 || | |||||||| || || || Sbjct 4047 GCGATGAGGCGCTCAGCAAACGA 4069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589160719313240