Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq18243 244 3e-60 >seq18243 Length=2233 Score = 244 bits (270), Expect = 3e-60 Identities = 352/490 (72%), Gaps = 10/490 (2%) Strand=Plus/Plus Query 30655 TCGAGCCGGGCAGCGTGTTCCAGCTCATGCGACCGGACATCAACCAGGAGGTGTACGGCC 30714 |||| ||||| |||| | || |||| || ||||||||||||||| | || ||||||| Sbjct 36 TCGACGCGGGCGGCGTAGTTCACCTCAAACGTCCGGACATCAACCAGAACGTCTACGGCC 95 Query 30715 TGCCCGAATATCTCAGCTCGCTTCACTCGGCCTGGCTGAACGAGTCGTCGACGCTGTTCC 30774 | |||||||| || || | || || || || | || |||||| | |||| ||||||| Sbjct 96 TACCCGAATACCTTGGCGCCCTGCAGTCAGCGTTCCTCAACGAGGCCGCGACCCTGTTCC 155 Query 30775 GGCGGAAGTATTACGAAAACGGTAGCCACGCCGGCTTCATCCTCTACATGACCGACGCGG 30834 | || ||||| ||| ||||| |||| |||||| ||||| || |||||| | | Sbjct 156 GCCGCAAGTACTACCTCAACGGCTCGCACGTCGGCTTTATCCTGCGCAGCACCGAC-CAG 214 Query 30835 CGCAGAAGC-AGGAGGATGTCGACAACATGCGCACGGCGTTGAAGAACGCG---AAGGGG 30890 || ||| |||| || ||||| ||| || |||| || | || | |||||| Sbjct 215 AACATGAGCCAGGAAGAGGTCGATGCCAT---CAAGGCGAAGATGCGCGAGGGCAAGGGG 271 Query 30891 CCGGGCAATTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAAAAGGACGGTATCCAG 30950 ||||| || ||||| ||| | ||||| || | || |||||| | || | || |||||| Sbjct 272 CCGGGGAACTTCCGGAACCTCTTCATCCACTCACCAGGCGGGCATGAGAAGGGCATCCAG 331 Query 30951 CTCATCCCAGTGTCCGAGGTCGCGGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACG 31010 |||| || | |||| |||| || ||||||||||| || ||||||||| || Sbjct 332 ATCATTCCGATCAGCGAGATCGCCGCCAAGGACGAGTTTGTCGGGATCAAGAACACCTCG 391 Query 31011 CGCGACGACCTGCTCGCCGCGCATCGCGTGCCGCCGCAACTGCTCGGTATCGTGCCGAGC 31070 ||||||||| | || ||||||||||| |||||||| || ||||| || |||||||| | Sbjct 392 CGCGACGACGTCCTGGCCGCGCATCGGGTGCCGCCCCAGCTGCTGGGCATCGTGCCCGCC 451 Query 31071 AATTCGGGCGGGTTCGG-CACGCCGGACACCGCGGCGCGCGTGTTCGGTCGCAACGAAAT 31129 || | ||||| ||||| | | | || | || || |||||||| |||||||| || Sbjct 452 AACGCCGGCGGCTTCGGTGATGTC-GATAAGGCCTCGGCCGTGTTCGAGCGCAACGAGAT 510 Query 31130 CAAGCCGCTG 31139 ||||||| || Sbjct 511 CAAGCCGTTG 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129483189825154