Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015272.2 Length=88322 Score E Sequences producing significant alignments: (Bits) Value seq107653 100 2e-16 seq109371 95.1 7e-15 >seq107653 Length=176415 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 12/214 (6%) Strand=Plus/Plus Query 38900 CTACTACCAGGTAGAGGTCCGAAACCCCACCTCTGGCG---GGGAGCCCTACATAGGGGA 38956 |||||||||||| ||| || | ||||| | || |||| || ||| | | || Sbjct 44242 CTACTACCAGGTGGAGATCAAGGATCCCACGACACCCGACCGGGACCCGTACGTCGCTGA 44301 Query 38957 GTGCAACGATTTTATCGAAGCACTGGGCATGACCTTCGCCGAAGCGAACGTGTTCAAGGC 39016 ||||||||| | ||||| || |||||||||||||||||||| | |||| |||||||| Sbjct 44302 GTGCAACGACATCATCGAGGCTCTGGGCATGACCTTCGCCGAGGGCAACGCCTTCAAGGC 44361 Query 39017 AATCTGGCGA---AAAGCAGCCGAGCGCACCTTGGGTAAGAAAAAGAAGGGCAACA---A 39070 ||||||||| |||||| || || |||| ||| ||||| ||| | Sbjct 44362 CATCTGGCGATCCTGCGCAGCC---CGGTCCCTGGGGCTCTCCAAGGAGGGCTACAAGGA 44418 Query 39071 CGCTGTCTATGACGCCGAGAAGATGGTATTCTTC 39104 || ||||| ||| |||||||| |||| |||||| Sbjct 44419 CGGGGTCTACGACTCCGAGAAGGTGGTCTTCTTC 44452 >seq109371 Length=32687 Score = 95.1 bits (104), Expect = 7e-15 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 68998 TACGCCTACTTCGGTGTTAACCCCAGCACGGCGGATGCCAGTACAGACGATGCTACCGTC 69057 ||||||| |||||| || ||||||||||| || || |||| |||||| || || || Sbjct 1812 TACGCCTTCTTCGGCGTCAACCCCAGCACAGCCGACGCCACCGAAGACGACGCGACGGTG 1753 Query 69058 CGAAAGTGGCGAGGCTTCACCGAGAGAAATGGAGGCCACAAGTTCATTGTAGGGAACGTC 69117 || |||||| |||||| | | || ||||| ||||| || || ||||| Sbjct 1752 CGCAAGTGGACCGGCTTCGTCAAAGCCTGGGGCGGCCAGCGCTTCATCGTCGGCAACGTG 1693 Query 69118 TTCTGCTATCGGGCCACCGACGTGAAAGAGCTGAGAAAAGTGGACGACCCGTTCGGACCT 69177 ||| |||||| |||||||||||| || ||| ||| ||||| |||||||| Sbjct 1692 TTCGCCTATCGCGCCACCGACGTGCGCGACCTGGCCGGAGTAGACGATCCGTTCGGCGAC 1633 Query 69178 GAAAGCGTGGATTACTTCCAGTCCATCCTGGCCGAAGCTGACATCCTGGTGCCGTGCTGG 69237 || | || || || || |||| | ||| || |||||||| || || |||||| Sbjct 1632 GAGATCGGCGAACACATCACCGACATCATCTGCGAGGCCGACATCCTCGTCCCCTGCTGG 1573 Query 69238 GG 69239 || Sbjct 1572 GG 1571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 282122730842563