Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq18243 183 6e-42 >seq18243 Length=2233 Score = 183 bits (202), Expect = 6e-42 Identities = 307/443 (69%), Gaps = 26/443 (6%) Strand=Plus/Plus Query 27014 cccGACATTAATCAAGAGGTGTACGGCTTGCCCGAATATCTCGGCGCGCTGCACTCGGCA 27073 || ||||| || || | || |||||| | |||||||| || ||||| ||||| || || Sbjct 68 CCGGACATCAACCAGAACGTCTACGGCCTACCCGAATACCTTGGCGCCCTGCAGTCAGCG 127 Query 27074 TGGTTGAACGAGTCGGCGACGCTCTTTCGTCGCAAGTATTACGAGAATGGATCGCACGCC 27133 | | |||||| | ||||| || || || |||||||| ||| || || ||||||| | Sbjct 128 TTCCTCAACGAGGCCGCGACCCTGTTCCGCCGCAAGTACTACCTCAACGGCTCGCACGTC 187 Query 27134 GGTTTCATCCTGTACATGACCGA--------TGCGGCGCAAAG---TCAAAGCGATGTCG 27182 || || |||||| || ||||| || | | ||| || | || || | Sbjct 188 GGCTTTATCCTGCGCAGCACCGACCAGAACATGAGCCAGGAAGAGGTCGATGCCATCAAG 247 Query 27183 AC-AAGATGCGCGAGGCGTTGAAGAACAGCAAGGGGCCGGGGAATTTCCGAAACCTTTTC 27241 | ||||||||||||| |||||||||||||||| ||||| ||||| ||| Sbjct 248 GCGAAGATGCGCGAGG------------GCAAGGGGCCGGGGAACTTCCGGAACCTCTTC 295 Query 27242 ATGTACGCGCC-GAACGGCAAGAAAGACGGCATCCAGCTCATTCCGGTTTCCGAGGTCAC 27300 || || | || | |||| || | | ||||||||| |||||||| | |||| || | Sbjct 296 ATCCACTCACCAGGCGGGCATGAGA-AGGGCATCCAGATCATTCCGATCAGCGAGATCGC 354 Query 27301 GGCGAAAGACGAGTTCTTCAACATCAAGAATGTCACGCGCGACGACTTGCTCGCGGCGCA 27360 || || |||||||| || |||||||| | ||||||||||| | || || ||||| Sbjct 355 CGCCAAGGACGAGTTTGTCGGGATCAAGAACACCTCGCGCGACGACGTCCTGGCCGCGCA 414 Query 27361 TCGCATCCCGCCTCAGCTCATGGGGATCGTGCCGAGCAATACCGGCGGATTCGGCGCAAC 27420 ||| | ||||| ||||| |||| |||||||| ||| ||||||| ||||| | Sbjct 415 TCGGGTGCCGCCCCAGCTGCTGGGCATCGTGCCCGCCAACGCCGGCGGCTTCGGTGATGT 474 Query 27421 GGACAAGGCCGCCGAGGTGTTCG 27443 || |||||| | | ||||||| Sbjct 475 CGATAAGGCCTCGGCCGTGTTCG 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103156400630998