Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq107653 188 9e-43 seq93596 84.2 3e-11 seq106218 82.4 9e-11 >seq107653 Length=176415 Score = 188 bits (208), Expect = 9e-43 Identities = 509/776 (66%), Gaps = 36/776 (5%) Strand=Plus/Minus Query 103456 GAAATGGCTTTCTCGATCGAGAAGGTCACCGTTACTGCTAAGTCCAGAGCACTCAAGGCA 103515 || ||||| ||| ||||||||||||||||| || || ||| | | || || || Sbjct 133145 GAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGCC 133086 Query 103516 GAGTACTCCTTAGAACTGGCACAAGACCTCAAGGCAATCCACGGTCTGAACGCTGAAGCA 103575 |||||||| | ||||||||||| ||||| |||||| | |||||||| |||| || || Sbjct 133085 GAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGCT 133026 Query 103576 GAACTCGCTAACATCCTGTCGAGCGAGATTCTTGCTGAGATCAACCGTGAAGTCATCAGA 103635 || ||| | |||||||| | | |||||| || || ||||||||||| || | | | Sbjct 133025 GAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCGT 132966 Query 103636 ACCATCTATAAGGTTTCTGAGCAAGG--TGCTGTTTCTAACACCGCTACCGCTGGTGTAT 103693 || || | | |||| || || | | |||| | | | | || | | Sbjct 132965 ACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGAT--CGACACGACCAACCCGGGCTTCT 132908 Query 103694 TCGACCTCGACATCGACTCCAACGGTCGCTGGAGTGTTGAGAAGTTCAAGGGTCTCCTGT 103753 ||||||| ||| ||||||| ||||| |||||| |||||||||||||||||||| | Sbjct 132907 TCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATT 132848 Query 103754 TCCAAATCGAGCGTGACGCTAACGCAATTGCACAGCGCACTCGTAGAGGAAAGGGCAACA 103813 |||| |||||||| || ||| || || || || | | || ||||| |||| Sbjct 132847 TCCACATCGAGCGCGAGTGCAACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACA 132788 Query 103814 TGATCCTCTGCTCCGCAGACGTTGCTTCCGCCCTCACCATGGCAGGTGTACTTGATTACA 103873 | | ||||| | || ||||| || || || || | | || || ||| | | || Sbjct 132787 TCCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGG-CTACCT--CTCCA 132731 Query 103874 CCCCTGCCCTCAACGCTAACCTTAACGTTGATGACACCGGTAACACCTTCGCTGGTGTTC 103933 || ||| | ||||| | || || ||||| || ||||||||||| ||| | | Sbjct 132730 TGCCGAACCTGGGTGACAACCTCCAGGTCGACGACACGGGCAACACCTTCGCGGGTATCC 132671 Query 103934 TGCAAGGTAAGTATC-GTGTATACATCGATCCTTATTCTTCCAACCTCACCTCTGCTAAC 103992 || | ||| | ||| || |||||||| | ||| || | | Sbjct 132670 TGAACGGT-CGCATCAAGGTCTACATCGA------------------CCCCTACGCGATC 132630 Query 103993 GCAGCAAACGGCAACCAGTACTACGTTGTTGGTTATAAGGGTACTTCACCTTATGACGCA 104052 | | ||| | || || | || || || |||||| | | ||||| ||||| Sbjct 132629 GGCGGAAA---CTACATGTGC------GTAGGCTACAAGGGTCCGACGCCTTACGACGCC 132579 Query 104053 GGTCTGTTCTATTGCCCATATGTTCCCCTCCAGATGGTTCGTGCCGTCGGAGAGAACACC 104112 || | ||||| ||||| || ||||| |||||| ||||||||| || | | | | Sbjct 132578 GGCATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAAC 132519 Query 104113 TTCCAGCCCAAGATTGGCTTTAAGACCCGCTACGGCATGGTCGCTAACCCATTCGCTGAA 104172 ||| || || ||||| ||||||||||||||||||||||| ||||| ||||| | Sbjct 132518 TTCGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCGCACAG 132459 Query 104173 GGAACCACTGTCGGCGCAGGTCGCCTCAGAGTTAACAGCAACCGCTACTACAGACG 104228 ||| || | ||| ||||| | || | |||||||| ||||||||| || Sbjct 132458 GGACTGACCGCCGGTGCAGGAGCCATCGTAAAAGACAGCAACGTCTACTACAGGCG 132403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 103084 TTCGACCCCGTTCTGATCTCCTTGATCAGACGCTCCATGCCTAACCTGGTCGCATATGAC 103143 |||||||| | |||||| | || |||| ||||||||||| |||||| | || || ||| Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 103144 CTCGCAGGCGTACAACCAATGTCTGGTCCTACCGGACTGATCTTCGCAATGCGCTC 103199 || || || || || ||| | ||||| ||||| ||||||||||| || ||||| Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCGCTC 133375 >seq93596 Length=211 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 140961 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAGTCCTACC 141020 |||||||| ||||||||||| ||||||||||||||| ||||| |||||||| |||| | Sbjct 14 TAGCTCAGCTGGATAGAGCACCTGCCTTCTAAGCAGGTGGTCGCAGGTTCGAATCCTGCA 73 Query 141021 TGGGTCGCC 141029 |||||||| Sbjct 74 GGGGTCGCC 82 >seq106218 Length=1744 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/84 (85%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 22310 GGGAGCGTGGCGGAATCGGTAGACGCACCAGACTTAAAATCTGTTGAGAATTATCTCGTG 22369 |||| ||||||||||||||||||||| || ||||||||||| |||| || | ||| |||| Sbjct 1647 GGGA-CGTGGCGGAATCGGTAGACGCGCCGGACTTAAAATCCGTTG-GAGTAATC-CGTG 1591 Query 22370 GGGGTTCAAGTCCCCCCGCTCCTA 22393 |||||| |||||| ||| |||| Sbjct 1590 TGGGTTCGAGTCCCACCGTCCCTA 1567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 609548340818040