Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq107653 277 2e-69 seq93596 86.0 7e-12 >seq107653 Length=176415 Score = 277 bits (306), Expect = 2e-69 Identities = 495/716 (69%), Gaps = 24/716 (3%) Strand=Plus/Minus Query 113899 GAGATGGGCTTCAGCATCGAGAAGGTTACTGTAACCGCTC-GTGCTCGCGCTCTGAAAGC 113957 ||||||| |||||||||||||||||| || || || || | || ||||| ||| || Sbjct 133145 GAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGC-CGCGCGCTGGCCGC 133087 Query 113958 AGAATACAGCATCGAACTCGCACAAGACCTGAAGGCAATTCATGGTCTGGACGCCGAGCA 114017 || ||| || ||||| ||||| |||||||||||| | || ||||| ||||||||| Sbjct 133086 CGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGC 133027 Query 114018 AGAGCTCAGCAACATTCTCTCTACTGAGATCCTTGCTGAAATCAACCGCGAAGTTGTTAG 114077 |||||| ||||| ||| | || |||||||| || || ||||||||||| | ||| | Sbjct 133026 TGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCG 132967 Query 114078 AACTATCTACACCAACGCTGTTGCTGGCGCTCAGAACAACACTGCTACTGCTGGTAAGTT 114137 || || ||| ||| || | |||| | |||| | | | || || Sbjct 132966 TACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTT 132907 Query 114138 CGACCTCGATGTCGATTCCAACGGTCGCTGGTCTGTTGAGAAGTTCAAAGGTCTTCTGTT 114197 |||||| || ||||| || ||||| |||||||| |||||||||||||| ||||| || Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTT 132847 Query 114198 CCAGATTGAGAGAGATTGCAACGCAATCGGTCATCAGACTCGTCGCGGGAAGGGCAACAT 114257 ||| || ||| | || |||||| |||| | |||| | || || ||||| ||||| Sbjct 132846 CCACATCGAGCGCGAGTGCAACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACAT 132787 Query 114258 CCTGATCGCTTCTGCTGATGTCGTTTCTGCTCTCGGCATGGCAGGC--GTTCTCGATTAC 114315 ||||||| | || || || | || ||||| | || ||| |||| || | Sbjct 132786 CCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGGCTACCTCTCCATGCC 132727 Query 114316 GCTCCTGCTCTGGCTGGTAACAACGGTCTGATCCCCGATGACAACTCCAGCACTCTGGTC 114375 | |||| ||| ||||| | | | ||| |||| || ||| | | Sbjct 132726 GAACCTG--------GGTGACAACCTCCAGGT---CGACGACACGGGCAACACCTTCGCG 132678 Query 114376 GGCACCCTGAACGGTCGCATCAAGGTCTACGTTGATCCTTATTCTGCTAACGTTGCTGAT 114435 || | ||||||||||||||||||||||||| | || || || || | || || || Sbjct 132677 GGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTA---CGCGATCG--GCGGA- 132624 Query 114436 AAGCACTACTACGTTGCAGGTTATAAGGGCACTTCTCCTTATGACGCAGGTCTGTTCTAT 114495 || || | ||| ||| || ||||| | | ||||| ||||| || | ||||| Sbjct 132623 AACTACATGTGCGT---AGGCTACAAGGGTCCGACGCCTTACGACGCCGGCATCTTCTAC 132567 Query 114496 TGCCCCTACGTCCCCCTCCAGCAAGTTCGTGCAATCAACCCGAACACCTTCCAGCCCAAG 114555 ||||| ||||| || |||||||| |||||||| | ||| | |||| || Sbjct 132566 TGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCTCGC 132507 Query 114556 ATCGGCTTCAAGACTCGCTACGGCATGGTCTCGAACCCCTTCGCACAGGGTCTGAC 114611 |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 132506 ATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCGCACAGGGACTGAC 132451 >seq93596 Length=211 Score = 86.0 bits (94), Expect = 7e-12 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 160623 TAGCTCAGC-GGATAGAGCAACTGCCTTCTAAGCAGTTGGTCGCAGGTTCAAATCCTGC 160680 ||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct 14 TAGCTCAGCTGGATAGAGCACCTGCCTTCTAAGCAGGTGGTCGCAGGTTCGAATCCTGC 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556150667566440