Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq107653 233 2e-56 >seq107653 Length=176415 Score = 233 bits (258), Expect = 2e-56 Identities = 489/718 (68%), Gaps = 23/718 (3%) Strand=Plus/Minus Query 112432 AACACGGCATTCCGTGAGATGGGTTTCTCGATCGAGAAAGTCACTGTAACCGCCAAGGCA 112491 ||||| || | | |||||||| ||| |||||||| ||||| || || || ||| Sbjct 133160 AACACTGCTTGGCCTGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGC 133101 Query 112492 CGCGCCCTGAAGGCTGAGTACAGCATCGAGATGGCACAAGACCTGAAGGCGATTCACGGT 112551 ||||| ||| || |||||| || || ||||||| ||||||||||| | |||||| Sbjct 133100 CGCGCGCTGGCCGCCGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGT 133041 Query 112552 CTGGATGCTGAAACTGAACTGGCTAACATCCTCAGCACAGAGATTCTTGCTGAAATCAAC 112611 || || || || |||| || | ||||||||| ||| ||||| || || || |||||| Sbjct 133040 CTCGACGCCGAGGCTGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAAC 132981 Query 112612 CGCGAAGTCGTTCGTACTATCGTAGTTAACGCTGTTGCTGGTGCTCAGAACAATACCGCT 112671 ||||| | |||||||| || | ||| || | |||| | | || | Sbjct 132980 CGCGAGGCGGTTCGTACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACC 132921 Query 112672 ACTGCTGGTATCTTTGACCTTGACGTTGACAGCAACGGTCGTTGGTCTGTTGAGAAGTTC 112731 | | || |||| ||||| ||||| ||| ||||| || ||||| |||||||||||| Sbjct 132920 AACCCGGGCTTCTTCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTC 132861 Query 112732 AAAGGACTTCTGTTCCAGATTGAGCGCGA-TGCTAACGCTATCGGTCAGCAAACTCGTCG 112790 || || || ||||| || |||||||| ||| ||| |||| || | || | || Sbjct 132860 AAGGGTCTGTATTTCCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGAGGCG 132802 Query 112791 TGGCAAAGGCAACATCCTGATCTGTTCTGCCGACGTTGCTTCTGCACTGGGCATGGCTGG 112850 |||||| || |||||||||||||| | || ||||| || || || ||| | || || Sbjct 132801 TGGCAAGGGTAACATCCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGG 132742 Query 112851 TGTTCTTGACTACACCCCTGCTCTTGCTGGTAACAACGGTCTTGCAGCAGTTGATGATAC 112910 || || || || | | || ||| |||| | | ||| || || || || Sbjct 132741 CTACCT---CTCCATGCC-GAACCTG--GGTGACAA----CCTCCAG--GTCGACGACAC 132694 Query 112911 CTCCAGCACACTGGTTGGTACACTCAACGGTCGCATCAAGGTCTACGTTGATCCTTACTC 112970 || ||| | | |||| || ||||||||||||||||||||| | || || ||| Sbjct 132693 GGGCAACACCTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTAC-- 132636 Query 112971 TGCTAACGTTTCAGACAAGCACTTCTATGTTGCTGGTTATAAGGGTACTTCACCTTATGA 113030 || | || | || || || | | || || || |||||| | | ||||| || Sbjct 132635 -GCGATCG--GCGGA-AACTACATGTGCGT---AGGCTACAAGGGTCCGACGCCTTACGA 132583 Query 113031 CGCTGGTCTGTTCTATTGCCCATATGTTCCTCTTCAGCAGGTTCGTGCAATCAACCCTAA 113090 ||| || | ||||| ||||| || |||||||| |||||||||||||| | || Sbjct 132582 CGCCGGCATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGG 132523 Query 113091 CACCTTCCAACCAAAAATCGGTTTCAAGACTCGCTACGGCATGGTCTCGAACCCCTTC 113148 | |||| || ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct 132522 TAACTTCGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTC 132465 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 112066 TTCGACCCTGTACTGATCAGCCTCATCCGTCGCTCCATGCCTCAACTGATCGCCTATGAT 112125 |||||||| | ||||||| ||| || | ||||||||||| | ||||| ||||| || Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 112126 ATTGCTGGCGTTCAACCCATGACTGGTCCTACTGGACTGATCTTCGCAATGCG 112178 || || || || |||||||| ||||| || || ||||||||||| || || Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCG 133378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556808951270200