Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq107653 282 5e-71 >seq107653 Length=176415 Score = 282 bits (312), Expect = 5e-71 Identities = 516/740 (70%), Gaps = 33/740 (4%) Strand=Plus/Minus Query 114650 TCTAACACGGCATTCCGTGAGATGGGTTTCTCGATCGAGAAGGTTACTGTAACCGCTC-G 114708 || ||||| || | | |||||||| ||| ||||||||||| || || || || | Sbjct 133163 TCGAACACTGCTTGGCCTGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAG 133104 Query 114709 TGCTCGTGCGCTGAAGGCAGAATACAGCATCGAACTCGCACAAGACCTGAAGGCGATTCA 114768 || || |||||| || || ||| || ||||| ||||| ||||||||||| | || Sbjct 133103 AGC-CGCGCGCTGGCCGCCGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACA 133045 Query 114769 TGGTCTGGATGCTGAGCAAGAGCTCGCTAACATTCTCAGCACTGAGATCCTGGCAGAAAT 114828 ||||| || || ||| |||||| | ||||| ||| ||| ||||||||||| || || Sbjct 133044 CGGTCTCGACGCCGAGGCTGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGAT 132985 Query 114829 CAACCGCGAAGTTGTTAGAACCATTTACACCAACGCTGTAAAGGGTGCTCAGAACAACAC 114888 ||||||||| | ||| | || | ||| ||| |||| | |||| | |||| Sbjct 132984 CAACCGCGAGGCGGTTCGTACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACAC 132925 Query 114889 CGCAACTGCTGGTGTATTCGACCTCGACGTTGACTCCAACGGTCGCTGGTCTGTTGAGAA 114948 | | | || | |||||||| ||||| ||||| ||||| |||||||| |||||||| Sbjct 132924 GACCAACCCGGGCTTCTTCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAA 132865 Query 114949 GTTCAAGGGTCTCCTGTTCCAGATCGAAAGAGA-TGCTAACGCTATCGGTCAGCAAACTC 115007 |||||||||||| ||||| ||||| | || ||| ||| |||| || | || Sbjct 132864 GTTCAAGGGTCTGTATTTCCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGA 132806 Query 115008 GTCGCGGAAAGGGCAACATCCTGATCTGTTCTGCTGACGTTGCTTCTGCACTCGGTATGG 115067 | || || ||||| |||||||||||||| | || ||||| || || || || | Sbjct 132805 GGCGTGGCAAGGGTAACATCCTGATCTGCACGGCGGACGTGGCATCGGCTCT-------G 132753 Query 115068 CAGGCGTTCTGGATTACTC-CCCTGCTCTGAAC---GGCAACAACGCTCTGACTGGCGTT 115123 | || | || | ||| || || | |||| || ||||| ||| | | || Sbjct 132752 AACGC-CGCCGGCTACCTCTCCATG--CCGAACCTGGGTGACAAC-CTC---CAG--GTC 132702 Query 115124 GATGATACCTCCAGCACTCTGGTTGGTACTCTGAACGGTCGCATCAAGGTCTACGTTGAT 115183 || || || || ||| | | |||| |||||||||||||||||||||||| | || Sbjct 132701 GACGACACGGGCAACACCTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGAC 132642 Query 115184 CCTTATTCTGCTAACGTTGCTGATAAGCACTACTACGTTGCAGGTTATAAGGGCACTTCT 115243 || || || | || || || || || | ||| ||| || ||||| | | Sbjct 132641 CCCTA---CGCGATCG--GCGGA-AACTACATGTGCGT---AGGCTACAAGGGTCCGACG 132591 Query 115244 CCTTATGACGCAGGTCTGTTCTACTGCCCTTACGTTCCTCTCCAGCAGGTTCGTGCAATC 115303 ||||| ||||| || | ||||||||||| |||||||||||||||||||||||||| | Sbjct 132590 CCTTACGACGCCGGCATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTG 132531 Query 115304 AACCCTGACACCTTCCAGCCCAAGATCGGCTTCAAGACTCGCTACGGCATGGTCTCGAAC 115363 || | | |||| || |||||||||||||| ||||||||||||||| ||||| Sbjct 132530 TGGCCGGGTAACTTCGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAAC 132471 Query 115364 CCCTTCGCACAAGGTCTGAC 115383 ||||||||||| || ||||| Sbjct 132470 CCCTTCGCACAGGGACTGAC 132451 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 114293 TTTGACCCTGTTCTGATCTCCCTGATCAGACGCTCCATGCCTCAACTGATCGCTTACGAT 114352 || ||||| | |||||| |||| |||| ||||||||||| | ||||| || ||||| Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 114353 ATCGCAGGCGTTCAACCGATGACTGGTCCTACTGGACTGATCTTCGCAATGCG 114405 ||| || || || || ||||| ||||| || || ||||||||||| || || Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCG 133378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559828747872400