Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq107653 203 5e-47 >seq107653 Length=176415 Score = 203 bits (224), Expect = 5e-47 Identities = 469/698 (67%), Gaps = 18/698 (3%) Strand=Plus/Minus Query 128493 GAGATGGCATTCAGCATCGAGAAAGTTACTGTGACTGCGAAGTCCAGAGCACTCAAAGCT 128552 |||||||| |||||||||||||| || || || || |||||| | | || || || Sbjct 133145 GAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGCC 133086 Query 128553 GAGTACAGTTTAGAATTGGCTCAAGACCTTAAGGCAATTCACGGATTAAACGCTGAGTCT 128612 |||||| | ||| |||| || ||||| |||||| | ||||| | |||| ||| || Sbjct 133085 GAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGCT 133026 Query 128613 GAACTCGCAAACATTCTCTCTACTGAGATTCTTGCTGAGATCAACCGCGAAGTTATCCGT 128672 || ||| | ||||| ||| | || ||||| || || |||||||||||||| | | ||| Sbjct 133025 GAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCGT 132966 Query 128673 ACTATCTACAAGGTCGCAGAACAAGGTGCAACAATCAACACTGCAACTGCTGGAACATTC 128732 || || | ||| | || || | ||| |||| | | | || ||| Sbjct 132965 ACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTTC 132906 Query 128733 GACTTAGACACTGACTCCAACGGTCGTTGGTCAGTTGAGAAGTTCAAGGGACTTCTATTC 128792 ||| | ||| ||||| ||||| || ||||| ||||||||||||||||| || ||| Sbjct 132905 GACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTTC 132846 Query 128793 CAGATCGAAAGAGA-TGCGAACCAAATCGCACAAAGA-ACTCGTCGCGGAAAGGGCAACG 128850 || ||||| | || ||| ||||| ||||| ||| || || | || || ||||| ||| Sbjct 132845 CACATCGAGCGCGAGTGC-AACCAGATCGC-CAAGGAGACGAGGCGTGGCAAGGGTAACA 132788 Query 128851 TGGTTCTCTGCTCTGCCGACGTTGCTTCAGCTCTTACAATGGCTGGAATCCTTGATTACA 128910 | | ||||| | || ||||| || || ||||| | || || ||| | || Sbjct 132787 TCCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGGCTACCT---CTCCA 132731 Query 128911 CCCCTGCACTTAACGCTAACTTAAACGTTGACGACACTGGCAACACATTTGCTGGTACTC 128970 || || | ||| | | || |||||||| |||||||| || || |||| | Sbjct 132730 TGCCGAACCTGGGTGACAACCTCCAGGTCGACGACACGGGCAACACCTTCGCGGGTATCC 132671 Query 128971 TTGCTGGTAAGTACAAAGTTTACATCGATCCTTTCGCTGCAAACAATGACGCTAATCAGT 129030 | ||| ||| || |||||||| || | ||| | | || | | | Sbjct 132670 TGAACGGTCGCATCAAGGTCTACATCGACCCCTACGC------GATCGGCGGAA---ACT 132620 Query 129031 ACTACGT-TGTTGGTTACAAGGGTACTAACCCTTATGACGCTGGACTGTTCTACTGCCCT 129089 || | || || || ||||||||| | | ||||| ||||| || | ||||||||||| Sbjct 132619 AC-ATGTGCGTAGGCTACAAGGGTCCGACGCCTTACGACGCCGGCATCTTCTACTGCCCG 132561 Query 129090 TACGTTCCTCTTCAGATGGTTCGTGCTGTGGGTCAGGACACCTTCCAACCAAAAATTGGC 129149 ||||||||||| ||| ||||||||||||| | | || | |||| || || ||| Sbjct 132560 TACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCTCGCATCGGC 132501 Query 129150 TTCAAGACTCGTTACGGAATCGTTGCAAACCCATTTGC 129187 |||||||| || ||||| || || || ||||| || || Sbjct 132500 TTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCGC 132463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744045927262480