Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq107653 123 3e-23 >seq107653 Length=176415 Score = 123 bits (136), Expect = 3e-23 Identities = 458/713 (64%), Gaps = 35/713 (5%) Strand=Plus/Minus Query 118681 GAGATGTCATTCAGCATTGAGAAGACTTCTGTGACTGCAAAGTCCAGAGCTCTCAAAGCA 118740 |||||| | |||||||| |||||| | || || || ||| | | || || || Sbjct 133145 GAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGCC 133086 Query 118741 GAATACACCTTGGAACTGGCACAAGACCTTAAGGCAATCCACGGTCTTGATGCTGAGCAG 118800 || ||| | ||||||||||||| ||||| |||||| | |||||||| || || ||| Sbjct 133085 GAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGCT 133026 Query 118801 GAACTTGCTAACATCTTGTCTAGCGAAGTCCTTGCAGAAATCAACCGCGAAGTCGTCCGT 118860 || || | |||||| | | | ||| |||| || || ||||||||||| | || ||| Sbjct 133025 GAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCGT 132966 Query 118861 CGCGTATACAGCGTTGCTAAGCCTGGTGCTGCA-ANNNNNNNNNNNNNNNNNNNNATCTT 118919 || | | || |||| || | ||| | |||| Sbjct 132965 ACGGTCCTGACCTCCGCCAAGCAGGGATC-GCAGATCGACACGACCAACCCGGGCTTCTT 132907 Query 118920 TGACCTCGACGTTGACAGCAATGGTCGTTGGTCCGTTGAGAAGTTCAAAGGACTTCTGTT 118979 ||||| ||||| ||| || || || ||||| |||||||||||||| || || || Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTT 132847 Query 118980 CCAAATTGAGCGCGATTGTAACGCAATTGCACAAGACACTCGTCGTGGCAAAGGCAACTT 119039 ||| || |||||||| || ||| || || | || || | |||||||| || ||| | Sbjct 132846 CCACATCGAGCGCGAGTGCAACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACAT 132787 Query 119040 CCTCATCTGTTCTGCAGACGTTGCAAGTGCTTTGGCAATG--GCAGGCGTTCTTGACTAC 119097 ||| ||||| | || ||||| ||| ||| || || | || ||| || || | Sbjct 132786 CCTGATCTGCACGGCGGACGTGGCATCGGCTCTG--AACGCCGCCGGCTACCT---CTCC 132732 Query 119098 AGCAGTGGTCTAACTGGCGCTGGCGGTCCTGCAATCGGCACTGTCGATGACACTGGTAAC 119157 | | | ||| ||| ||| ||| | || ||||| ||||| || ||| Sbjct 132731 A-----TGCCGAAC-----CTG--GGT--GACAACCTCCA-GGTCGACGACACGGGCAAC 132687 Query 119158 CTGGCAGTTGGAACCATCAATGGTCGCATCAAGGTCTATGTTGATCCTTATGCTGCTAAC 119217 | || | | | || ||||||||||||||||| | || || || || Sbjct 132686 ACCTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTACGC------G 132633 Query 119218 CTCAGCGACAAGCACTACTATGT-CGTAGGTTACAAGGGCACTTCCCCTTATGACGCTGG 119276 || ||| | ||||| |||| |||||| |||||||| | | ||||| ||||| || Sbjct 132632 ATCGGCGGAA---ACTAC-ATGTGCGTAGGCTACAAGGGTCCGACGCCTTACGACGCCGG 132577 Query 119277 ACTGTTCTACTGTCCTTACGTTCCCCTCCAGATGGTTCGCTCGATCGATCCTAACAACTT 119336 | |||||||| || |||||||| |||||| |||||| | | || ||||| Sbjct 132576 CATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTT 132517 Query 119337 CCAACCAAAAATTGGTTTCAAGACTCGTTACGGCATGGTCAGCAATCCTTTCG 119389 | || || || |||||||| || |||||||||||| || || |||| Sbjct 132516 CGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCG 132464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610845734913800