Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq110395 132 1e-25 seq106734 123 6e-23 seq109771 111 3e-19 seq107974 102 2e-16 seq6868 100 6e-16 seq102539 86.0 1e-11 >seq110395 Length=10286 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || |||||||| || || || ||||| |||| || || | ||| || ||||||||| Sbjct 9958 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGCTGC 9899 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||||||||| || ||||| || || || |||||||| || || || ||||| Sbjct 9898 TTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGGATTTTG 9839 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||| || ||||| || || ||| || || ||||| | |||||| || || Sbjct 9838 GCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTTCCCAGTA 9779 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 9778 AGCGTCTTAACGAAGATCTGCAT 9756 Score = 123 bits (136), Expect = 6e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| || || || || || || || ||||||||||||| || || | || ||||| | Sbjct 10191 CAAGATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCA 10132 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| ||||| || || || || || ||||| || || |||||||| ||||| || | Sbjct 10131 ACTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGA 10072 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| || |||||||| || || || || ||||| | ||||| | Sbjct 10071 TCTTAGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCC 10012 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || ||||| | |||||| Sbjct 10011 CAGTGAGCGTCTTGACGAATATTTGCAT 9984 Score = 95.1 bits (104), Expect = 3e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || || || ||||| || | |||||| | || || |||||||| Sbjct 9731 GTGGAGAGTGGACTCCTTCTGGATGTTGTARTCAGAAAGAGTCCGTCCGTCCTCGAGCTG 9672 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||| || |||||||| || ||||| ||||| ||||| |||| Sbjct 9671 CTTTCCAGCGAAGATCAGGCGTTGCTGGTCGGGAGGGATGC 9631 >seq106734 Length=403 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || ||||| |||||||| || || ||||| || || | || || | ||| || || | | Sbjct 236 AGATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAAC 177 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || |||||||| || ||||||||||| || || || ||||| ||||| ||||| Sbjct 176 TGCTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATC 117 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||||||||| || || ||||||||| || || || || || | ||||| || Sbjct 116 TTGGCCTTGACGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCC 57 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | ||||| Sbjct 56 GTGAGCGTCTTCACAAAGATCTGCAT 31 >seq109771 Length=16137 Score = 111 bits (122), Expect = 3e-19 Identities = 87/104 (84%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || ||||| ||| |||||| | |||||||| Sbjct 11256 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGAGTGCGGCCATCTTCA 11197 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| ||||||||||| ||||| |||||||| |||||||| Sbjct 11196 AGCTGCTTTCCTGCGAAGATGAGTCGCTGTTGGTCAGGAGGAAT 11153 >seq107974 Length=16430 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||||||||||||||| || || || || ||||||| || |||||| Sbjct 9498 ACAAGGTGGAGAGTGGACTCTTTTTGGATGTTATAGTCACTCAGAGTTCGACCGTCTTCG 9439 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || |||||||| || |||||||| || || ||||| Sbjct 9438 AGCTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCGGGGGGAAT 9395 >seq6868 Length=121 Score = 100 bits (110), Expect = 6e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || || ||||||||||| || ||||| ||||| ||||||||||| || || || || || Sbjct 120 CCGTCCTCGAGCTGCTTGCCGGCGAAAATAAGACGTTGTTGGTCGGGCGGGATACCCTCC 61 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||||||||| ||| ||||| |||||||| || || ||||| || || ||| Sbjct 60 TTGTCTTGAATTTTGGCCTTCACGTTGTCAATGGTATCGGATGACTCCACCTCCAGCGTA 1 >seq102539 Length=187 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| || || |||||||| || ||||||||||| | |||||||| || || || Sbjct 85 AACCAAGTGGAGGGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTTCGGCCGTCCTC 144 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGG 195032 |||||| || || ||||| || || ||||| ||||| || || Sbjct 145 GAGCTGTTTGCCAGCGAAAATGAGACGTTGCTGGTCGGGCGG 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107900851875167