Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq106734 93.3 3e-14 >seq106734 Length=403 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || ||||||||||| || | || | || |||| ||| || ||||| || Sbjct 221 TCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAACTGCTTGCCGGCGAAG 162 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||| ||||| | || | || |||||||| |||||| ||||| Sbjct 161 ATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATCTTGGCCTTGAC---- 106 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| | ||| || || | || || || || |||||||| ||||| Sbjct 105 GTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCCGTGAGCGTCTT 46 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 45 CACAAAGATCTGCAT 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324193636357128