Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq50839 134 5e-27 seq81523 98.7 3e-16 seq109371 96.9 1e-15 seq81106 91.5 5e-14 >seq50839 Length=349 Score = 134 bits (148), Expect = 5e-27 Identities = 198/280 (71%), Gaps = 3/280 (1%) Strand=Plus/Minus Query 3724 GATTGGCTACGACTGGTGGACCGGTGAAGGTGTCACGGCAAAACGCATTGCTGGCGCTCT 3783 ||||||| | |||| ||||||||||||||||| ||||| || ||||| | | | Sbjct 291 GATTGGCGAAGACTATTGGACCGGTGAAGGTGTGACGGCCAAGAAGATTGCCGCCAAGTT 232 Query 3784 GCGCTCCATCGGCAACGATGTCGATGTGACCGTGAACATCAACAGCCCCGGCGGCGACGT 3843 ||| | | | || || |||| | || |||||||| || ||||| ||| | Sbjct 231 GCGTGAGCTGGACGGCGCTG---ATGTTTCGGTTTACATCAACTCGCCTGGCGGTGACAT 175 Query 3844 ATTCGAAGGCCTGGCCATTTACAACCTGCTGCGCGAGCACAAGGGCAAGGTCACGGTGAA 3903 |||||||||||||||||||||||| ||||||||||| |||| ||| | || || || Sbjct 174 GTTCGAAGGCCTGGCCATTTACAACTTGCTGCGCGAGTACAAAGGCGACGTAACCACCAA 115 Query 3904 CATCATCGGCCTGGCTGCCTCTGCCGCCTCTTTCATCGCCATGGCGGGGGATGAAATCCG 3963 || ||| ||||||| |||||||| ||| | ||| |||||| || ||| | | Sbjct 114 GGCTATTGGCATGGCTGCATCTGCCGCGTCTGTGATCTACATGGCTGGTGATACACGTCA 55 Query 3964 CATCGGCCGCGCCGCCTTCCTGATGATCCATAACGCCTGG 4003 || || | || || ||||||||||| ||||||||| Sbjct 54 GATTGGTTCGTCTGCGTTTCTGATGATCCACAACGCCTGG 15 >seq81523 Length=13279 Score = 98.7 bits (108), Expect = 3e-16 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 45544 CCAGCTCAACCGAG-GTTGCGAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGC 45602 |||||||||||| | || ||| |||||||||||||| ||| | | ||||||| Sbjct 1927 CCAGCTCAACCGCTCGGTG-GAGCAGCGCCCCGACAAGCGGCCGATGATGTCTGACCTGC 1985 Query 45603 GCGAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGA 45660 |||| ||||||||||| ||||| || ||||||||| |||||||| | |||||||| || Sbjct 1986 GCGAATCCGGCGCCATCGAGCAGGATGCCGACATCATCATGTTCATCTACCGCGACGA 2043 >seq109371 Length=32687 Score = 96.9 bits (106), Expect = 1e-15 Identities = 77/92 (84%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 38376 TCTTCGC---TGATGTCCTGCAGGCGCTCGACGCGAACAGCGGTGATCTCCAGCAGGATG 38432 ||||||| ||||| | ||||||||||| | ||| || |||||||||||||| |||| Sbjct 6516 TCTTCGCGGGTGATGGCTTGCAGGCGCTCCAGGCGGACGCCGGTGATCTCCAGCGTGATG 6575 Query 38433 CGGGAGGCCCAGCGGGGCATGTGGATACTTGG 38464 || ||||||||||||||||||||||| || || Sbjct 6576 CGAGAGGCCCAGCGGGGCATGTGGATGCTGGG 6607 >seq81106 Length=13242 Score = 91.5 bits (100), Expect = 5e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 38379 TCGCTGATGTCCTGCAGGCGCTCGACGCGAACAGCGGTGATCTCCAGCAGGATGCGGGAG 38438 |||||||| ||||||||||||||||||| || |||||| ||| |||||||||||| | Sbjct 7435 TCGCTGATCGCCTGCAGGCGCTCGACGCGCACGTCGGTGACCTCGAGCAGGATGCGGCTG 7376 Query 38439 GCCCAGCGGGGCATG 38453 ||||||||| ||||| Sbjct 7375 GCCCAGCGGTGCATG 7361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172527074706932