Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq90678 143 1e-29 seq108184 87.8 7e-13 seq51864 87.8 7e-13 >seq90678 Length=1150 Score = 143 bits (158), Expect = 1e-29 Identities = 227/323 (70%), Gaps = 3/323 (1%) Strand=Plus/Plus Query 43960 AGCGGTCATAGTGCCGCGAGCTGACGTCGTGCCGGCTATGGTTCTGAAGCCGGTCCCCTT 44019 ||||||||||| || |||||||| || ||| | |||||||| || ||||| | Sbjct 1 AGCGGTCATAGGGCTTGGAGCTGACATCCTGCAGCGCGTGGTTCTGCAGGCGGTCTCGG- 59 Query 44020 ATCTCCTGCGTCAGCCCGGCCTTGCCTGCCAGCGTTTTCCACGTCCGCCGCAGGTCGCGG 44079 || |||| | | || |||||||| ||||| || || |||| || || ||||| ||| Sbjct 60 ATTTCCTTGGGAACGCCCGCCTTGCCCGCCAGGGTCTTGAACGTTCGACGTAGGTCCCGG 119 Query 44080 TTCGTGATGTCCGGCAGCACGCCCCGGTCCCGTTGCCGCCAAAGGGCGGAATAGAGGGTG 44139 || ||| || || | ||||| || || || || |||||| | || |||||| ||| Sbjct 120 TTGGTGGCGTGGGGAATGACGCCACGATCACGCTG--GCCAAACGACGCTATAGAGCGTG 177 Query 44140 CCGTGACTGACGGGCTTCTCGGGATCCATCTGCGAGGGGAAGAACCAGCCGTGCTCGTTC 44199 ||||| ||||| ||||| | || || ||||||| ||||||||||||| ||||| Sbjct 178 CCGTGGCTGACTGGCTTGGCCGGGTCGCGTGGCGAGGGAAAGAACCAGCCGTATTCGTTG 237 Query 44200 GTGCCGATTTCGTCCAGCAGCTCGATGGCGAGCGACGGCAGCGGGATCGTGTGAGGCTTC 44259 | | |||| || | || || ||| |||| ||| | ||| | | ||| |||| | Sbjct 238 GGGATGATTGACTCGATTAGTTCAGCGGCCAGCGCCGGGACCGGTACGGCGTGGGGCTGC 297 Query 44260 CCGTTCTTCGTCTTTGACCAGTC 44282 ||| || ||||| |||||||| Sbjct 298 ATGTTTTTGGTCTTGGACCAGTC 320 >seq108184 Length=27730 Score = 87.8 bits (96), Expect = 7e-13 Identities = 125/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 36096 GCTGTTCGGCAAGGTCCGCACCGGCCGCGTCCGCGTCCTGTTCGGCTCCACGGCTAAGAT 36155 |||||||||| | |||||| ||||| || || ||||| ||||||| | | || || Sbjct 20633 GCTGTTCGGCGATGTCCGCGCCGGCAAGGTTCGGTTCCTGATCGGCTCATCCGATACCAT 20692 Query 36156 GGGTGCCGGCATGAACGTGCAAAACA--GGCTGGTGGCTCTCCACCACCTCGACGCACCA 36213 ||| ||||| | || |||| ||| | ||| ||| || ||||| ||||| | || Sbjct 20693 GGGCACCGGCGTCAA--TGCACAACTTCGCCTGAAGGCGCTGCACCATCTCGATGTGCCG 20750 Query 36214 TGGCGCCCGTCTGACCTCGAACAGCGCGAGGGCCGCATCATCCGTCAGGGTAAC 36267 ||| || || | |||| |||||||||||||||||| | || ||||| ||| Sbjct 20751 TGGTTGCCCTCGCAGATCGAGCAGCGCGAGGGCCGCATCGTGCGGCAGGGCAAC 20804 >seq51864 Length=1649 Score = 87.8 bits (96), Expect = 7e-13 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 1451 CAACATCATCCTGAAGGCCCGCCAGCTCGGCTTTACGACGTTCCTATGTATCTTCTTCCT 1510 |||||||||||||||||| || |||||||| || |||||| || || | ||| || Sbjct 1351 CAACATCATCCTGAAGGCTCGGCAGCTCGGGTTCACGACGCTCTGCTGCCTGATCTATCT 1410 Query 1511 CGACTGCACCCTGTTCCGGCCGAACGTGCGCGCCGGCATCATCGCCCACGAAGAGGACGC 1570 |||| | | | ||| ||||||| | || ||| |||| |||||| | ||||| Sbjct 1411 CGACGCCTGCATTTTCACGCCGAACACCAGGGCGGGCGTCATTGCCCACAAGTTGGACGA 1470 Query 1571 GGCGAAGGCCATCTTCCGAGACAAGGTGAAGTT 1603 | |||| ||||||||| |||||| | ||||| Sbjct 1471 TTCAAAGGTCATCTTCCGGGACAAGATCAAGTT 1503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193906805188712