Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq107681 156 5e-33 >seq107681 Length=5071 Score = 156 bits (172), Expect = 5e-33 Identities = 591/918 (64%), Gaps = 46/918 (5%) Strand=Plus/Minus Query 36868 TATTCATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTC 36927 |||||| || || ||||||| || ||||| || | | |||| || ||||| || || | Sbjct 4525 TATTCAGCACGCCGCTTTTTTGGTAATCTCCTACCCTTTTTTCAAAGAAATTGGTTTTGC 4466 Query 36928 CTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTAC 36987 ||| ||| ||||| | |||||||||||||| || ||||||| || | || Sbjct 4465 CTTGTAGGGATATCATCTCCATAAAATCAAACGGGTTAGATGCGCCGTACA-----CTTT 4411 Query 36988 ATGATAATTCC-TTCAGAAGCCTATCC--------GCAACAAATTCTATGTATTTACACA 37038 | ||||| | ||| ||||| || || ||||| || ||||||| | || Sbjct 4410 AGGATAACCCAGTTC----GCCTAACCAACGGTCAGCCACAAACTCAATGTATTGGCTCA 4355 Query 37039 TTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTT 37098 | | || | ||| || || |||| ||| || | ||| || || |||| ||||| Sbjct 4354 TCAATTTAGCGTTCATCCCTATTAACGATACCGGCAATGCGTCGGTAATAAATTCTTTTT 4295 Query 37099 CTATTATTACAGCATCTTTAACTATATTAACAATAACTTCT----TCAGTTGGGGGATAT 37154 | || ||| || || ||| || || || ||||| |||||| ||| Sbjct 4294 CAATCTCTACCGCGTCGGTAATAATTTTGGTAACTGCTTCTGTGCTCAGTT------TAT 4241 Query 37155 TTTAAATATTTAAACAATAAA-----CATGCAAAATCACAATGTAAACCTTCATCTCTAC 37209 | | | | || |||| || ||||| || || ||| |||||||||| | Sbjct 4240 TCTCCAGCAT---ACCGTAAAGCAGGCAGGCAAATTCGCAGTGTGAACCTTCATCGCGCG 4184 Query 37210 TTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATA 37269 ||||| ||| ||| |||||| ||||| ||||| | || | |||||| | ||| || | Sbjct 4183 ATATCAGTTCGTTACTAAAGGTCAATCCGGGCATCAGGCCACGTTTTTTTAACCAGAAGA 4124 Query 37270 TTGCTGCAAAAGATCCA-GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT 37328 | | || ||| ||| ||||||||||| |||||||| || ||||||||||| | ||| Sbjct 4123 TAGAA-CAGAAGCTCCCTGAAAAGAAAATGCCTTCAACAGCCGCAAATGCTACCAAACG- 4066 Query 37329 GTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTA 37388 | |||| || | | | ||||| | ||| |||||||| || Sbjct 4065 CTCGGCAAAGGTG--CCGTTGT---TGATCCAGCGCAGCGCCCACTCTGCCTTCTTTTGC 4011 Query 37389 ACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATA 37448 |||||| ||| || |||| || | || | | | |||||| | ||| | || Sbjct 4010 ACACATGGAATCGTATCAACCGCGTGGAACAAACGATCTTTTTCAACCGGGTCTTTAATG 3951 Query 37449 TAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAA 37508 |||||||| || |||| || | || ||||| || || || || ||||||||| Sbjct 3950 TAAGTATCTATCAGTAGCGCGTAGGTCTCTGAGTGGATGTTCTCCATCATGATCTGAAAA 3891 Query 37509 CCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTT 37568 || ||||| || | ||||| | |||||| || ||| | | || || ||| | |||| Sbjct 3890 CCGTAAAAGCAACGGGCTTCGGGTAATTGCACCTCGCTCATGAAGTTCACAGCAAGGTTT 3831 Query 37569 TCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTT 37628 || || || || ||||| || || ||||| ||||| || | | || |||||| | Sbjct 3830 TCGTTCACAATACCATCGCTGGCGGCAAAAAAAGCCAGGATGTGCGAAATGAAATGTTTC 3771 Query 37629 TCATCATTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAAC 37687 || | | | || || ||||| || | || | || | |||| ||| || | Sbjct 3770 TC-GCCCGGGTTCATGGCTTCCCAATGTTTCAGGTCGTCCGACAGGTCAATTTCTTCGGC 3712 Query 37688 GGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGG 37747 |||||||| || || | |||||||||| ||||||| || | || ||| || Sbjct 3711 TGTCCAAAAGCTGGCTTCCGATTTTTTATACATCTCCCAAATAGCAGGGTATTTTATAGG 3652 Query 37748 AAATATTACAAATCTATC 37765 || ||||||||| | ||| Sbjct 3651 AAGTATTACAAAGCGATC 3634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591493472244040