Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq66098 150 3e-31 seq29707 111 3e-19 seq20529 98.7 2e-15 seq108235 84.2 4e-11 >seq66098 Length=313 Score = 150 bits (166), Expect = 3e-31 Identities = 177/237 (75%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 22987 TCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGC-TTGGTGT 23045 || |||||||| | || ||||| |||||||||||||| || || ||||| || || Sbjct 14 TCGAAGAACAGCACCTGGGCGCAGCCTTCGCCAGCGTAAAT-TTTGGCGGGCAGCGGCGT 72 Query 23046 GGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTT 23105 ||| ||| || ||||| || | |||||| ||| || ||||| | ||| || ||||| Sbjct 73 GGTGTTGCTGAATTCCAGCGTCACATAGCCTTCCCACTCGGGTTCGAACGGGGTCACGTT 132 Query 23106 TACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATACGTCACG 23165 |||||||||||||| |||||||| || |||||||| |||||||| | || | || Sbjct 133 GACGATGATGCCGCAGCGCGCATAGGTGGATTTGCCCAGGCAGATGGTCAGCACATTGCG 192 Query 23166 CGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGAT 23222 ||||||| ||||| || |||| |||||||| || || |||||||| ||||| Sbjct 193 CGGAATGCGGAAGTACTCGACCGTGCGGGCCAGTGCAAAGCTATTCGGCGGGATGAT 249 >seq29707 Length=3443 Score = 111 bits (122), Expect = 3e-19 Identities = 184/260 (71%), Gaps = 13/260 (5%) Strand=Plus/Minus Query 23094 CGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAAC 23153 |||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct 3443 CGGCGTCACGTTGACGATGATGCCGCAGCGTGCATACGTCGATTTGCCGAGGCAGACCGT 3384 Query 23154 TAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGG 23213 | || | ||||| ||| ||||| ||| |||| ||| || ||||| || || Sbjct 3383 CAGCACATTGCGCGGGATGCGGAAGTATTCGATCGTGCGTGCGAGCGCGAAGGAATTGGG 3324 Query 23214 CGGAATGATCAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGAAATTGTCTTCG--GTG 23271 ||| ||||| | | | || | | || || ||| ||||| | |||| | Sbjct 3323 CGGGATGATGCAGACATCGC--TCTTGA---TG--TCG--ACGAA--GGAGTTCGAATCG 3275 Query 23272 AAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACCTTGAATTCGTTACCG 23331 || ||||| || ||||| | | | | || | ||| ||||| |||||||| |||| || Sbjct 3274 AAGTTCTTCGGGTCGACGATGGTGCTGTTGATGTTCGTGAACACCTTGAACTCGTCGGCG 3215 Query 23332 CAACGAATATCGTAGCCGTA 23351 || || |||||||||||||| Sbjct 3214 CAGCGGATATCGTAGCCGTA 3195 >seq20529 Length=145 Score = 98.7 bits (108), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 22987 TCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGCTTGGTGTG 23046 || |||||||| | || ||||| |||||||| ||||||||| ||||| || ||| Sbjct 132 TCGAAGAACAGCACCTGCGCGCAGCCTTCGCCGGCGTAGATCTTGGCCGGCAGCGGCGTG 73 Query 23047 GTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTT 23106 || ||||| || || || || | |||||| ||| || ||||| | |||||| ||||| Sbjct 72 GTGTTGGAGAATTCGAGCGTCACATAGCCTTCCCACTCCGGTTCGAACGGCGTCACGTTG 13 Query 23107 ACGATGATGCCG 23118 |||||||||||| Sbjct 12 ACGATGATGCCG 1 >seq108235 Length=15805 Score = 84.2 bits (92), Expect = 4e-11 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 22987 TCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGCTT-GGTGT 23045 || |||||||| | || || || |||||||| || |||||| || ||||| || || Sbjct 132 TCGAAGAACAGCACCTGCGCACAGCCTTCGCCCGCATAGATCT-TGGCGGGCAGCGGCGT 74 Query 23046 GGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTT 23105 ||| ||| |||||||| || | |||||| ||| || || || | |||||| ||||| Sbjct 73 GGTGTTGCTGAACTCCAGCGTCACATAGCCTTCCCACTCGGGCTCGAACGGCGTCACGTT 14 Query 23106 TACGATGATGCCG 23118 |||||||||||| Sbjct 13 GACGATGATGCCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896345933676080