Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq53202 163 9e-36 seq107328 87.8 6e-13 >seq53202 Length=9363 Score = 163 bits (180), Expect = 9e-36 Identities = 225/313 (72%), Gaps = 10/313 (3%) Strand=Plus/Minus Query 25978 ACAATTTCAGTGGTGTAGCGCTCAACGCCGTCCTTTTCCC---ACTTGCGGGTTTTCAGT 26034 ||||| || || | ||| ||| ||||| ||||| || ||||||| || | ||| Sbjct 2116 ACAATGTCGGTCGCGTACTTCTCGACGCCATCCTTGTCGGTATACTTGCGCGTCTGCAGA 2057 Query 26035 TGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCCGCTACC 26094 | || |||| ||| ||| |||||||| |||||||||| ||| ||||||| || | Sbjct 2056 CGGCCTTCAACGTAGACCGACGAACCTTTTTTCAGGTACTGGCCAACGATCTCGGCCAGA 1997 Query 26095 TTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTA 26154 ||| || | | || ||| |||||||| || ||| |||| |||||||| | ||| Sbjct 1996 CGGCCGAAGAACGAGATGCGGTGCCATTCGGTGGTTTCCTTCTGCTCGCCGGTGTTCTTG 1937 Query 26155 TCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATTAGGCATG 26214 || ||| | | ||||| || |||| ||||||||||| ||| |||| | |||||| Sbjct 1936 TCTTTCGAACGGAACGAGGTGGCCACGGCAATGTTGGCGATGGCGTCGCCGCTGGGCATG 1877 Query 26215 TAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTACGCCGCGT 26274 || ||||| || |||||| ||||||||| ||||| | ||| |||||||| || | Sbjct 1876 TAGCGGATTTCCGGATCGCGCCCCAGGTTGCCGACGATGATGACTTTATTCAC------T 1823 Query 26275 GATGCCAT-TATT 26286 |||||||| |||| Sbjct 1822 GATGCCATGTATT 1810 >seq107328 Length=16160 Score = 87.8 bits (96), Expect = 6e-13 Identities = 197/293 (67%), Gaps = 5/293 (2%) Strand=Plus/Plus Query 25981 ATTTCAGTGGTGTAGCGCTCAACGCCGTCCTTTTCC---CACTTGCGGGTTTTCAGTTGC 26037 || || ||||||||| || ||| ||||| ||| ||||||||||| ||||| | Sbjct 15783 ATCTCGGTGGTGTAGGTGTCCTTGCCTTCCTTGTCCTGCCACTTGCGGGTCTTCAGGCGG 15842 Query 26038 CCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCCGCTACCTTG 26097 || || | ||| || | || ||||||||||| ||||| || || || || | | Sbjct 15843 CCTTCGACGTAGACGGGGCGGCCCTTCTTCAGGTATTCGCCAGCAATTTCAGCCAAACGG 15902 Query 26098 CCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCT-GCTTATC 26156 | | || ||||| |||||||| ||| |||| | ||||||||||| || || Sbjct 15903 TCGTTGAAAACCACGCGGTGCCATTCGGTCTCTTCCTGGCGTTCGCCGGTCTCGCGGTTC 15962 Query 26157 GTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATTAGGCATGTA 26216 |||||| | | ||| || | | | || || |||||||| | || |||| Sbjct 15963 -TTCCAGTTGCGGGTGGTGGCCAGGCTGATCGTGCACCAGGCGCCGCCGCTGGGGTTGTA 16021 Query 26217 ACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTACGC 26269 ||||| ||| || ||| || ||||| |||| ||||| ||||| || |||| Sbjct 16022 ACGGACCTCGGGGTCGCGGCCGAGGTTGCCGATGAGGATGACTTTGTTGACGC 16074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159606558961366