Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_018278.1 Length=42832 Score E Sequences producing significant alignments: (Bits) Value seq84563 113 1e-20 >seq84563 Length=11991 Score = 113 bits (124), Expect = 1e-20 Identities = 256/380 (67%), Gaps = 4/380 (1%) Strand=Plus/Minus Query 4520 GAAATCCCGTTTATGTTCATGGGTTCGGAAAACAACGATTCGAACCCGGACAATCCGAAC 4579 ||||||||||| | |||||| ||| | | | ||||| | | ||| |||| Sbjct 4754 GAAATCCCGTTCAAGTTCATCGGTGCCCACGATAACGACGCCGATGTTGACTATCCACCG 4695 Query 4580 TTTTACGATTTG-GCGTCGCTGAATATGGCGCATTATCGCAATTCGGCGGATTACGAAGA 4638 ||| ||| || ||| || ||| | ||||| |||||||| || || || ||||| Sbjct 4694 GCTTATGATCTGTGCG-ATCTCAATCTTGCGCACTATCGCAACAGCGCCGACTATGAAGA 4636 Query 4639 ATCATGCTTTATCGTCGGACAGCCGACGCCGGTTCTTACCGGCCTTACCGAAGAATGGGT 4698 | || || || |||||||| || || |||||| | |||||| | || ||| |||||| Sbjct 4635 AGCAACGTTCATGGTCGGACAACCAACACCGGTTGTCACCGGCTTGACAGAACAATGGGC 4576 Query 4699 TAACAACGTTCTGAAAGGAACG-GTCAACTTCGGTTCGCGCGGCGGCATCCCGCTTCCGG 4757 | |||| || | ||||| | || | || || || | || ||| ||||||||| Sbjct 4575 TGACAA-GTATTTCAAGGATGGTATCGGGCTAGGCTCTCGTGCCGCGATCACGCTTCCGG 4517 Query 4758 TCGGCGCAACTGCGGATTTGTTGCAGGCCGAACCGAATACGATGTTGAAAGAAGCGATGG 4817 | |||| | || || | | ||||| | | | || ||| |||||| || |||| Sbjct 4516 TTGGCGGTTCCGCCGAACTCCTACAGGCTGCAGAAACTAACATGGCGAAAGACGCCATGG 4457 Query 4818 ACACGAAAGAACGGCAAATGGTCGCGCTTGGCGCAAAGCTTGTCGAACAAAAAGAAGTCC 4877 | ||| ||||| || ||||| || || || || ||||| ||||| ||| || | Sbjct 4456 ATCAGAAGGAACGCCAGATGGTTGCCCTGGGGGCTAAGCTAGTCGAGCAAGCCACGGTGC 4397 Query 4878 AGCGCACGGCGACCGAAGCA 4897 ||||||||||||| || ||| Sbjct 4396 AGCGCACGGCGACTGAGGCA 4377 Score = 86.0 bits (94), Expect = 2e-12 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 7936 CAGGCCGAATGGTCGTACAACGTCGGCATCAAAGGCTTCGCTTGGGACAAGGCGAACGGC 7995 ||| |||| |||||||| ||||||||| |||| |||||| | ||||||||||| |||||| Sbjct 1410 CAGTCCGAGTGGTCGTATAACGTCGGCGTCAAGGGCTTCACCTGGGACAAGGCCAACGGC 1351 Query 7996 GGCAAATCGCCGACCGAC-GCGGCGTTGTTCACTTCGACCAATTGGGAC 8043 || | | |||| |||| ||||| | |||| || | ||||||||| Sbjct 1350 GGGCATGCTCCGA-CGACTTCGGCGCTTCTCACGGCGTCGAATTGGGAC 1303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136759968047428