Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq110395 122 7e-23 seq70823 84.2 2e-11 >seq110395 Length=10286 Score = 122 bits (134), Expect = 7e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| ||||| || || ||||||||||||| || || | | | || ||||| || Sbjct 10187 ATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAACTG 10128 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| |||||||| |||| ||||| || |||||||| |||||||| || || || || || Sbjct 10127 CTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTT 10068 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| |||| || || || || |||| || || || || Sbjct 10067 AGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCAGT 10008 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | || || || ||||| |||||| |||||||| Sbjct 10007 GAGCGTCTTGACGAATATTTGCATGCCGCCGCGAAGA 9971 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| ||||| || || || || || ||||| |||| || || | | || || Sbjct 9964 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCG 9905 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | ||||||||||||||| || |||||||| ||||| || Sbjct 9904 AGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGG 9845 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || | || | || || |||| ||| || || || |||| ||| || Sbjct 9844 ATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTTC 9785 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || || || ||||||||| Sbjct 9784 CCAGTAAGCGTCTTAACGAAGATCTGCATG 9755 >seq70823 Length=785 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | ||| | || || ||||||||||| ||||| || || |||||||| | Sbjct 348 TTCCTCCACAGAGACGAAGGACCAAGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCTG 289 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| | | ||||| || ||||| || | || ||| || || || | Sbjct 288 AAAGAGTGCAGCCATCCTGAAGCTGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAG 229 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | |||||||| || | ||||| || ||| ||| | | | || |||| | || | Sbjct 228 GGATGCCTTCCTTGTTCTGAATCTTGGCTTTCACATTGCCAATGGTATCAGTTGGCTCAA 169 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | || | || || || || | || || ||||||||||| || Sbjct 168 CCTCTAATGTAATAGTCTTCCCTGTGAGGGTCTTGACAAATATCTGTAT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395741338868757