Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq45343 89.7 3e-13 seq107038 84.2 1e-11 >seq45343 Length=151 Score = 89.7 bits (98), Expect = 3e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 72808 CCTGAAAGACAATGGCGTCAAAATCTGGGATGCCTGGGCCGATGAAAATGGCGATTTAGG 72867 |||| | ||||| ||||||| |||||||| | ||||||||||| || |||||| | || Sbjct 119 CCTGCAGGACAACGGCGTCACGATCTGGGACGAATGGGCCGATGAGAACGGCGATCTCGG 60 Query 72868 CCCGGTCTATGGCAAGCAATGGCG 72891 |||||||||||| | ||||||||| Sbjct 59 CCCGGTCTATGGAAGGCAATGGCG 36 >seq107038 Length=13061 Score = 84.2 bits (92), Expect = 1e-11 Identities = 180/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 79549 ACGACCAACAATCGGATGGAGATGATGGGCGCCCTGATTGCGCTGGAGCGTCTGAAGTAC 79608 ||||||||||| || ||||| || ||| || | |||||| ||| ||||| | Sbjct 8687 ACGACCAACAACCGCATGGAATTGCTGGCGGCGATCTCTGCGCTCGAGGCTCTGACGCGT 8746 Query 79609 CCCTGCAACGTGATCCTGCATTCCGACAGCCAGTATCTAAAAAACGGCATGACGCTCTGG 79668 || ||| ||| ||| || | |||||| | ||| | |||||| | || ||| Sbjct 8747 CCATGCGCCGTCGACCTCTATACGGACAGCAACTATTTGCGCGGCGGCATCATGCAATGG 8806 Query 79669 ATGAAAGGCTGGAAGCGTAACGGATGGATCACGTCTGAGAAGAAGCCAGTCAAAAACGTC 79728 |||| |||||| || ||||| |||| || | || |||||||| ||||| || ||| Sbjct 8807 GTGAACGGCTGGGTCCGGAACGGCTGGAAGACCGCCGACAAGAAGCCGGTCAAGAATGTC 8866 Query 79729 GATCTCTGGAAACGTCTTGATGCGGCCGCCAGCCGTCACAATGTCCGCTGGAAGTGGGTT 79788 || || ||| | || || || ||| | |||||| | || ||| | ||||| Sbjct 8867 GACCTGTGGCAGCGCCTCATGGCTGCCCGCGACCGTCATGACGTGACATGGCATTGGGTG 8926 Query 79789 AAAGGTCATGCCGGTCATCGCGAGAACGA 79817 ||||| || ||||| ||| || ||||| Sbjct 8927 AAAGGCCACGCCGGACATGATGAAAACGA 8955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 329984178004860