Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq107653 165 9e-36 >seq107653 Length=176415 Score = 165 bits (182), Expect = 9e-36 Identities = 478/724 (66%), Gaps = 29/724 (4%) Strand=Plus/Minus Query 112981 TCTAACACTGCGTTCAGAGAGATGGGTTTCTCCATCGAGAAGGTGACTGTTACTGCTAAG 113040 || |||||||| | ||||||| ||| |||||||||||| || || || || ||| Sbjct 133163 TCGAACACTGCTTGGCCTGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAG 133104 Query 113041 GCAAGAGCTTTAAAGGCAGAGTACAGCATCGAACTTGCTCAAGACTTGAAAGCAATTCAC 113100 | || | || |||||| || ||||| || || ||| |||| ||| | ||| Sbjct 133103 AGCCGCGCGCTGGCCGCCGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACAC 133044 Query 113101 GGTCTTGATGCCGAGCAAGAACTTAGCAACATTCTCTCTACTGAGATTCTTGCTGAGATC 113160 ||||| || |||||| || || ||||| ||| | || ||||| || || |||||| Sbjct 133043 GGTCTCGACGCCGAGGCTGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATC 132984 Query 113161 AACAGAGAAGTTGTTCGTACTATCTACACTAACGCTGTAGCAGGTG-CACAGAACAATAC 113219 ||| | || | |||||||| || || ||| |||||| | |||| | | || Sbjct 132983 AACCGCGAGGCGGTTCGTACGGTCCTGACCTCCGCCA-AGCAGGGATCGCAGATCGACAC 132925 Query 113220 TTCTTCTGCAGGTATCTTCGACCTTGACGTTGACTCTAATGGTCGTTGGTCAGTTGAGAA 113279 | | || |||||||||| ||||| ||||| || || || ||||| |||||||| Sbjct 132924 GACCAACCCGGGCTTCTTCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAA 132865 Query 113280 GTTCAAAGGACTTCTTTTCCAGATCGAAAGAGA-TGCTAACGCTATCGGTCAGCAAACTC 113338 |||||| || || |||||| ||||| | || ||| ||| |||| || | || Sbjct 132864 GTTCAAGGGTCTGTATTTCCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGA 132806 Query 113339 GTCGCGGGAAGGGCAACATCTTGATCTGCTCTGCAGACGTTGCTTCTGCTCTAGGTATGG 113398 | || || ||||| |||||| |||||||| | || ||||| || || ||||| | | Sbjct 132805 GGCGTGGCAAGGGTAACATCCTGATCTGCACGGCGGACGTGGCATCGGCTCT---GAACG 132749 Query 113399 CAGGCGTTCTTGATTACGCTCCAGGTTTA--CAAGGTAACAACGCACTTACAGGTGTAGA 113456 | | || | | | ||||| | | | ||| ||| || | ||| || || Sbjct 132748 CCGCCG-----GCTACCTCTCCATGCCGAACCTGGGTGACA----ACCTCCAG--GTCGA 132700 Query 113457 CGATACTTCTTCTACTCTCGTTGGTACTCTTAACGGACGCATCAAGGTTTACGTTGATCC 113516 ||| || || ||| |||| || ||||| ||||||||||| ||| | || || Sbjct 132699 CGACACGGGCAACACCTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCC 132640 Query 113517 TTACTCTGCTAACGTTGCTGACAAGCACTTCTACGTTGCAGGATACAAAGGTACTTCACC 113576 ||| || | || || || || || | | ||| ||| ||||| ||| | | || Sbjct 132639 CTAC---GCGATCG--GCGGA-AACTACATGTGCGT---AGGCTACAAGGGTCCGACGCC 132589 Query 113577 TTACGACGCAGGACTATTCTACTGTCCTTACGTTCCGTTACAGCAAGTTAGAGCAATCAA 113636 ||||||||| || | |||||||| || |||||||| | ||||| ||| | || | Sbjct 132588 TTACGACGCCGGCATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTG 132529 Query 113637 CCCTAACACCTTCCAACCAAAAATTGGTTTCAAGACTCGTTACGGTATGGTTTCTAACCC 113696 || | |||| || || || |||||||| || ||||| ||||| | ||||| Sbjct 132528 GCCGGGTAACTTCGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCC 132469 Query 113697 ATTC 113700 ||| Sbjct 132468 CTTC 132465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552316005214440