Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq107653 235 6e-57 >seq107653 Length=176415 Score = 235 bits (260), Expect = 6e-57 Identities = 483/705 (69%), Gaps = 25/705 (4%) Strand=Plus/Minus Query 109247 TGAGATGGGTTTCTCGATCGAGAAAGTCACTGTTACTGC-AAGAGCTCGCGCCCTGAAAG 109305 |||||||| ||| |||||||| ||||| || || || |||||| ||||| ||| | Sbjct 133146 TGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGC-CGCGCGCTGGCCG 133088 Query 109306 CAGAATACAGCATCGAGATGGCACAAGACCTGAAGGCAATTCATGGTCTGGATGCTGAGC 109365 | || ||| || || ||||||| |||||||||||| | || ||||| || || ||| Sbjct 133087 CCGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGG 133028 Query 109366 AAGAGCTTGCTAACATTCTTAGCACCGAGATCCTTGCTGAGATCAACCGTGAGGTTGTCC 109425 ||||| | ||||| || |||||||||||| || ||||||||||| |||| || | Sbjct 133027 CTGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTC 132968 Query 109426 GTACCATCTTCACCAACGCTGTTGCTGGTGCTCAAAACAATACCGCTAACGCTGGTATCT 109485 |||| || | ||| ||| || | || | | | || | ||| | || ||| Sbjct 132967 GTACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCT 132908 Query 109486 TTGACCTTGACGTTGACTCCAACGGTCGCTGGTCGGTTGAGAAATTCAAAGGACTTCTTT 109545 | ||||| ||||| ||||| ||||| ||||||||||||||||| ||||| || || || Sbjct 132907 TCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATT 132848 Query 109546 TCCAAATCGAAAGAGA-TGCTAACGCTATTGGTCAGCAAACTCGTCGTGGGAAAGGCAAC 109604 |||| ||||| | || ||| ||| || | || | || | ||||| || || ||| Sbjct 132847 TCCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAAC 132789 Query 109605 ATCCTGATCTGCTCTGCAGACGTTGCTTCTGCACTGGGTATGGCTGGTGTCCTTGACTAC 109664 |||||||||||| | || ||||| || || || ||| || || ||| || | Sbjct 132788 ATCCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGGCTACCT---CTCC 132732 Query 109665 ACCCCTGCTCTTGCTGGTAACAACGCCCTTACAGGTGTTGATGATACTTCTAGCACACTG 109724 | || | | || ||| |||| | | ||| || || || || | ||| | Sbjct 132731 ATGCC-GAACCTG--GGTGACAA----CCTCCAG--GTCGACGACACGGGCAACACCTTC 132681 Query 109725 GTCGGCACCCTCAACGGTCGCATCAAGGTCTACGTTGATCCTTACTCTGCTAACGTTGCT 109784 | || | ||| ||||||||||||||||||||| | || || ||| || | || || Sbjct 132680 GCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTAC---GCGATCG--GCG 132626 Query 109785 GACAAGCACTTCTACGTTGCTGGTTATAAGGGCACGTCACCTTATGACGCTGGTCTCTTC 109844 || || || | | ||| || || ||||| || | ||||| ||||| || ||||| Sbjct 132625 GA-AACTACATGTGCGT---AGGCTACAAGGGTCCGACGCCTTACGACGCCGGCATCTTC 132570 Query 109845 TATTGCCCATACGTTCCTCTGCAGCAAGTCAGAGCGATCAACCCTGACACCTTCCAACCA 109904 || ||||| ||||||||||| ||||| || | || | || | | |||| || Sbjct 132569 TACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCT 132510 Query 109905 AAAATTGGATTCAAGACTCGCTACGGCATGGTCTCCAATCCTTTC 109949 || || |||||||| ||||||||||||||| | || || ||| Sbjct 132509 CGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTC 132465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562426731615880