Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq18243 116 8e-22 >seq18243 Length=2233 Score = 116 bits (128), Expect = 8e-22 Identities = 280/420 (67%), Gaps = 8/420 (2%) Strand=Plus/Minus Query 11858 GCCTTCTCCACATCCCCAAACCCCCCAACATTACTCGGCATAATCCCCATCATCTGCGGC 11917 ||||| || ||||| || || || || | || |||| || |||| || ||| ||| Sbjct 483 GCCTTATCGACATCACCGAAGCCGCCGGCGTTGGCGGGCACGATGCCCAGCAGCTGGGGC 424 Query 11918 GGAACGCGGTGTGCTGCCATCATGTCATCGCGGCTCACGTTCTTGATGTTCAAAAACTCA 11977 || || || || || |||| | ||| ||||| ||||||||| | |||||| Sbjct 423 GGCACCCGATGCGCGGCCAGGACGTCGTCGCGCGAGGTGTTCTTGATCCCGACAAACTCG 364 Query 11978 TCCTTAGCTGCAACCTCCGAAAGTGGAATGATTTGGATACCGTCCTTTTTACCGTTGGGC 12037 ||||| || || | ||| | |||||||| ||||| || | || | ||| || Sbjct 363 TCCTTGGCGGCGATCTCGCTGATCGGAATGATCTGGATGCCCTTCTCATGCCCGCCTGGT 304 Query 12038 GAGTACATAAACAGGTTGCGGAAGTTGCCCGGCCCTTTGGC---GCTTTTCATTGCCTGG 12094 |||| || || ||||| |||||||| |||||||| ||| | || || | |||| | Sbjct 303 GAGTGGATGAAGAGGTTCCGGAAGTTCCCCGGCCCCTTGCCCTCGCGCATCTTCGCCTTG 244 Query 12095 CGGATGTTGTTCACGTCCTCCTGGTTC-TGCGCGGCGTCAGTCATGTACATGATGAAGCC 12153 ||| | || || |||||| || || | | ||| || || || ||| ||||| Sbjct 243 ---ATGGCATCGACCTCTTCCTGGCTCATGTTCTG-GTCGGTGCTGCGCAGGATAAAGCC 188 Query 12154 TGCGTGGCTACCGTTAATGTAGTACTTCCGGCGGAACAGTGTTGCGGACTCATTCAGCAG 12213 |||| ||||| | ||||||||| ||||||||||| || |||| ||| || || | Sbjct 187 GACGTGCGAGCCGTTGAGGTAGTACTTGCGGCGGAACAGGGTCGCGGCCTCGTTGAGGAA 128 Query 12214 GGCGGAAGGGATAGCTGACAGATATTCCGGCAGACCGTAAATCTCCTGGTTTAAATCCGG 12273 || || | | || || ||||| || || ||||| | | |||||| | ||||| Sbjct 127 CGCTGACTGCAGGGCGCCAAGGTATTCGGGTAGGCCGTAGACGTTCTGGTTGATGTCCGG 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108908794482598