Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq109776 235 1e-56 >seq109776 Length=48066 Score = 235 bits (260), Expect = 1e-56 Identities = 393/565 (70%), Gaps = 11/565 (2%) Strand=Plus/Plus Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186 || |||||| ||||| |||||| ||||||||| |||||||||||| | ||||| || Sbjct 3902 CAGGCAGGCGAAGTCGGTGTGCATGCCTTCGTCTCGGCTGATGAGCTCATTGGAAAATGT 3961 Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246 | || ||||||| || | || || ||||| ||||| ||||||||||| || ||||| Sbjct 3962 CAAGCCGGGCATGAGACCGCGCTTCTTCAGCCAAAAAATGGCCGCGAAAGAACCGGAGAA 4021 Query 48247 GAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTC 48306 |||||| ||||| || || || || ||| |||| | ||| | || |||| |||||||| Sbjct 4022 GAAGATCCCCTCAACCGCAGCAAAAGCGATGAGGCGCTCAGCAAACGAAGTCTTCTTGTC 4081 Query 48307 TGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 || |||||| ||| ||||| ||||| || ||||| || || || ||||| | || Sbjct 4082 CGAAATCCAGCGAAGAGCCCATTCTGCTTTGCGCTTGACACAGGGAATGGTCTCGACAGC 4141 Query 48367 CCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGC 48423 ||| || | | | ||| | | ||| || || || | |||| ||| | Sbjct 4142 GTCGAAAAGGTATTCACGTTCAGCAGGGTCTTTAATGTAAGTATCAATGAGAAGC---GA 4198 Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||| |||| ||||| | ||||| || ||| || || ||||||||| | ||||| Sbjct 4199 GTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGAAAACCGTAGAAGCAGCGAGCCTC 4258 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | || || || | ||||| | ||| | || ||||| ||||| || ||||| || Sbjct 4259 TGCGGCTTGGACCTCATTCGAGAAGCGCTCGACGAGGTTCTCGTTGACGATACCATCAGA 4318 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC--- 48600 || |||||||| || |||||||| | |||||| |||||||||| | |||| || Sbjct 4319 GGCTGCAAAGAAAGCGAGGACATGAGAGATGAAATGACGCTCGTTGTCGTTGAG-GCGGT 4377 Query 48601 -ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGA 48659 |||||| | |||| || || ||||||| || || ||||||| || || || Sbjct 4378 TCTTCCAGTCATGTAAATCCTTTGAGAGGTCCATCTCCTCTGCAGTCCAAAATGAGGCTT 4437 Query 48660 GTGCTTTTTTGTACATGCCCCATAT 48684 || || |||||||| |||||| Sbjct 4438 CGGCCTTCTTGTACATTTGCCATAT 4462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930237957763840