Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq109776 196 9e-45 seq107681 100 5e-16 seq103458 86.0 1e-11 >seq109776 Length=48066 Score = 196 bits (216), Expect = 9e-45 Identities = 441/656 (67%), Gaps = 24/656 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||||||||| || |||| ||||| || || ||||| || || Sbjct 4462 ATATGGCAAATGTACAAGAAGGCCGAAGCCTCATTTTGGACTGCAGAGGAGATGGACCTC 4403 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTT----TC 25588 | ||||| | | | |||| | ||| | | | | |||||| ||||| || Sbjct 4402 TCAAAGGATTTACATGACTGGAAGAACCGCCTCAACGACA-ACGAGCGTCATTTCATCTC 4344 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 ||| || | | || ||||||||||||||||||||||| || |||||||| || || Sbjct 4343 TCATGTCC----TCGCTTTCTTTGCAGCCTCTGATGGTATCGTCAACGAGAACCTCGTCG 4288 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || | ||| | | || || || || ||||| || ||||||||||| || || Sbjct 4287 AGCGCTTCTCGAATGAGGTCCAAGCCGCAGAGGCTCGCTGCTTCTACGGTTTTCAAATCA 4228 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || || || | ||||| ||| || | |||||| || || ||||||| || Sbjct 4227 TGATGGAGAACATTCACTCCGAGACCTACTC---GCTTCTCATTGATACTTACATTAAAG 4171 Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || || || | || || || | || ||||| ||| ||| | ||||| | | Sbjct 4170 ACCCTGCTGAACGTGAATACCTTTTCGACGCTGTCGAGACCATTCCCTGTGTCAAGCGCA 4111 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 | || ||||| | ||||| | ||| || |||||| ||||| || Sbjct 4110 AAGCAGAATGGGCTCTTCGCTGGATTTCGGACAAGAAGACTTCGTTTGCTGAGCGCCTCA 4051 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | || |||||||| || ||||| ||||| ||| |||||| || |||||||| || |||| Sbjct 4050 TCGCTTTTGCTGCGGTTGAGGGGATCTTCTTCTCCGGTTCTTTCGCGGCCATTTTTTGGC 3991 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 | ||| || || ||||||||| || |||||||| |||||||||||| | |||| Sbjct 3990 TGAAGAAGCGCGGTCTCATGCCCGGCTTGACATTTTCCAATGAGCTCATCAGCCGAGACG 3931 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTT 26065 | || | |||| || || ||||||||| | | || |||| | | | ||| | Sbjct 3930 AAGGCATGCACACCGACTTCGCCTGCCTGTTGTTCA---GCCATCTTAAACGCCGACC-T 3875 Query 26066 CTCAA-GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | ||| || |||| | | |||||||||||||||||| ||||||||| | ||||| Sbjct 3874 CACAACGACGTCGTCAAGAATATCATCAAAGAGGCTGTTGAGATCGAGCAAGAGTT 3819 >seq107681 Length=5071 Score = 100 bits (110), Expect = 5e-16 Identities = 518/821 (63%), Gaps = 31/821 (4%) Strand=Plus/Plus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAA 25572 ||||| |||||||| ||||| ||| | | ||| || | ||| | || | | Sbjct 3706 TGGACAGCCGAAGAAATTGACCTGTCGGACGACCTGAAACATTGGGAAGCCATGAACCCG 3765 Query 25573 GACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTG 25632 | |||| | ||||| | | || | |||| || ||||| ||| |||||||| ||| Sbjct 3766 GGCGAGAAACATTTCATTTCGCACATCCTGGCTTTTTTTGCCGCCAGCGATGGTATTGTG 3825 Query 25633 AACGAGAATCTGTGC-GAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTT 25691 ||||| || || ||| | || |||| || || ||||| | || ||| || || Sbjct 3826 AACGAAAACCT-TGCTGTGAACTTCATGAGCGAGGTGCAATTACCCGAAGCCCGTTGCTT 3884 Query 25692 CTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT 25751 |||||||| ||||| || || || | ||||| ||| || || ||| ||||| Sbjct 3885 TTACGGTTTTCAGATCATGATGGAGAACATCCACTCAGAGACCTACGC---GCTACTGAT 3941 Query 25752 G---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACAT 25808 || ||||||| |||| | || | |||||| |||| || | || || Sbjct 3942 AGATACTTACATTAAAGACCCGGTTGAAAAAGATCGTTTGTTCCACGCGGTTGATACGAT 4001 Query 25809 ACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTAC 25868 || | | | | |||||| |||||| || |||||||||| | || || Sbjct 4002 TCCATGTGTGCAAAAGAAGGCAGAGTGGGCGCTGCGCTGGATCAACAACG-----GC-AC 4055 Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTT--TTTCAGCGGTTCG 25926 |||| |||||| ||||||| ||||| ||||| || ||||| || |||||| || | Sbjct 4056 CTTTGCCGAGCGTTTGGTAGCATTTGCGGCTGTTGAAGGCATTTTCTTTTCAG-GGAGCT 4114 Query 25927 TTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACC--ATGCCCGGGCTGTACTTTTCCA 25984 | || | ||||||||| | || | || | | || |||||||| || |||| | Sbjct 4115 TCTGTT-CTATCTTCTGGTTAAA--AAAACGTGGCCTGATGCCCGGATTGACCTTTAGTA 4171 Query 25985 ACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGG 26044 |||| || || | || || ||| ||| | || |||||||||||||| ||| Sbjct 4172 ACGAACTGATATCGCGCGATGAAGGTTCACACTGCGAATTTGCCTGCCTGCTTTAC---- 4227 Query 26045 GCCACTTGCTCCACAA--ACCTTCTCA-AGAGACCGTCTACAGTATCATCAAAGAGGCTG 26101 | | |||| | || | || || ||| | || || || || | || || | Sbjct 4228 GGTA--TGCTGGAGAATAAACTGAGCACAGAAGCAGTTACCAAAATTATTACCGACGCGG 4285 Query 26102 TGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACA 26161 | ||||| || || || ||| | || |||||| Sbjct 4286 TAGAGATTGAAAAAGAATTTATTACCGACGCATTGCCGGTATCGTTAATAGGGATGAACG 4345 Query 26162 ACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGAC 26221 | | | ||||||||||||||||||| |||||| |||| | | | || | ||||| Sbjct 4346 CTAAATTGATGAGCCAATACATTGAGTTTGTGGCTGACCGTTGGTTAGGCGAACTGGGTT 4405 Query 26222 TCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAG 26281 | | | | ||| | | |||||||||| || |||||||| | ||||| | ||| Sbjct 4406 ATCCTAAAGTGTACGGCGCATCTAACCCGTTTGATTTTATGGAGATGATATCCCTACAAG 4465 Query 26282 GGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | || ||||| ||||||||||| ||||| || || || ||| Sbjct 4466 GCAAAACCAATTTCTTTGAAAAAAGGGTAGGAGATTACCAA 4506 >seq103458 Length=5285 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482 ||| | || || |||||||| || ||| ||||||| || || ||||| ||| | Sbjct 2300 GCACCATGATAAATGGTCTCGAATATCTGGATGTTGAGCACTTTAGCTTCGGGTGAATCG 2241 Query 221483 AAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 || ||||| || || ||| |||| | |||| || || || ||||| |||||||||||||| Sbjct 2240 AAAGGCATGCGAAGAATCATGAATG-CGTCAGCGAGACCTTGTACGCCGATACCGATGGG 2182 Query 221542 CCTGTGTCTCCTGTTGGAAGCGGCCGC--TTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 | || | |||||| | ||||| ||| || |||||| |||||||||| || Sbjct 2181 ACGATGACGGAAGTTGGA--CCGCCGCGTTTCGGGGGTCGGATAATAGTTGACGTCAATG 2124 Query 221600 AGATTGTTGAGGTT 221613 | ||||||| || Sbjct 2123 ACTCTGTTGAGATT 2110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927553694117440