Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq109209 95.1 1e-14 seq107030 89.7 6e-13 seq40814 82.4 9e-11 >seq109209 Length=24719 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/83 (88%), Gaps = 3/83 (4%) Strand=Plus/Plus Query 167463 GAATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCT-TGGTCCCAAACCAAGTGCGCT 167521 || ||||||||||| | ||||||||||| ||| |||| ||||||||||||| |||||| Sbjct 22860 GATTGGTCGGGGTGCACGGATTCGAACC-GCGGACCCTCTGGTCCCAAACCAGATGCGCT 22918 Query 167522 AACCAGACTGCGCTACACCCCGA 167544 |||||||||||||||||||||| Sbjct 22919 -ACCAGACTGCGCTACACCCCGA 22940 >seq107030 Length=1639 Score = 89.7 bits (98), Expect = 6e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 167466 TGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACC 167525 ||||||| || ||||||||||||||| | |||| ||||||||||||| ||||||| ||| Sbjct 1133 TGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGCGCT-ACC 1075 Query 167526 AGACTGCGCTACACCCCGA 167544 |||||||| |||| |||| Sbjct 1074 GGACTGCGCCACACTCCGA 1056 >seq40814 Length=282 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 167465 ATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAAC 167524 |||||||| | | ||||||||||||| || | | ||||||||||||| | ||||| || Sbjct 106 ATGGTCGGAGCGGCAGGATTCGAACCTGCGACATCCTGGTCCCAAACCAGGCGCGCT-AC 48 Query 167525 CAGACTGCGCTACACCCCGAAA 167546 ||||||||||||| | |||||| Sbjct 47 CAGACTGCGCTACGCTCCGAAA 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584124529424280