Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq108008 87.8 2e-12 >seq108008 Length=19013 Score = 87.8 bits (96), Expect = 2e-12 Identities = 188/281 (67%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 32003 GCCGAGCACGGTTGGTTACATTGCGGACCAGCTGGAGCAGGTCATTTTGTAAAGATGGTT 32062 ||||| || || | | || ||||| || || || || || || || |||||||| Sbjct 10823 GCCGAACAAGGCTATCTGCACTGCGGCCCGAACGGCGCCGGCCACTTCGTCAAGATGGTC 10882 Query 32063 CATAATGGAATCGAATACGGAATTATGCAAGCATACGCCGAAGGATTTAACATCTTGCAC 32122 || || || ||||| ||||| || ||| || |||||||||||| | |||||| ||| | Sbjct 10883 CACAACGGCATCGAGTACGGCATCATGGGCGCCTACGCCGAAGGACTGAACATCCTGCGC 10942 Query 32123 GAAGCTAACGCCGG---GGCAGCATACGTTGCTGAGGGTGACGCCGAAGTTGCTCCAATG 32179 | || ||| ||| | | | |||| || ||||||||| | || || Sbjct 10943 AACGCCAACATCGGCAAGCGCGAACACGT------GGTCGACGCCGAAACCACGCCGCTG 10996 Query 32180 GATAATCCGGAAGACTATCAGTATGATATTGACTGCGCTGAGGTGGCTGAGCTTTGGCGT 32239 || || ||| | | |||||| || | ||| || ||| | | ||||| ||||| Sbjct 10997 CGCAACCCCGAACATTTTCAGTACGAACTCGACCTCGGCGAGATCACCGAGCTGTGGCGG 11056 Query 32240 CGTGGTAGCGTGGTTGGTTCTTGGTTACTCGATCTTACCGC 32280 || || |||||| | |||| ||| | |||||||| ||||| Sbjct 11057 CGCGGCAGCGTGATCAGTTCCTGGCTGCTCGATCTGACCGC 11097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515762086344000