Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq109454 95.1 4e-15 >seq109454 Length=55839 Score = 95.1 bits (104), Expect = 4e-15 Identities = 267/410 (65%), Gaps = 0/410 (0%) Strand=Plus/Minus Query 17245 CGCGCCAGATATTTTAATCGGCGGCACGCCATGTCAGGCGTTTAGCGTGTCAGGCAGGCG 17304 ||| || || | || | |||||||||||| || || || || ||||| | ||| ||| Sbjct 36707 CGCCCCCGAGGTGTTCACCGGCGGCACGCCCTGCCAAGCCTTCAGCGTCGCCGGCCTGCG 36648 Query 17305 GGAGGGTTTAAGCGACCCGCGAGGCCAATTAACGCTGGCGTTTGTTGATATTGCTGATGC 17364 || | |||| |||| || | | | || ||| || || | || ||||| Sbjct 36647 CAAGTCGCTGGACGACGCGCGCGGAAATCTCTCCCTCAAGTTCGTCGAGCTCGCCGATGC 36588 Query 17365 AATAGACGATGTGAGAAAGGGCGCAGACCAGCCAGAATCAATTATTGTTTGGGAAAACGT 17424 ||| ||| |||| || |||||| |||| | | | | | ||||||||||| Sbjct 36587 AATTGACCATGTTCGAGGCCGCGCAGGAAAGCCCGCCTGCGTCGTCATCTGGGAAAACGT 36528 Query 17425 AACAGGAGTATTAAACAGTGCAGACAACGCATTCGGTTGTTTTCTCGGCGCGCTGGCCGG 17484 | || || | || ||||||||| ||||| || ||||| | | || ||||| Sbjct 36527 CCCCGGCGTCCTCTCCACGAAAGACAACGCCTTCGGGTGCTTTCTGGCTGGCCTTGCCGG 36468 Query 17485 GGAAAGTAGCGCATTACAGCCAGCAAGGGGAAGATGGCCGAACGCTGGTATTGTGTCTGG 17544 ||| | | || | | || |||| ||||| ||||||||||| |||| ||| Sbjct 36467 AGAAGATGACCCACTGGTCGCGCCAGGGGGCCGATGGGCGAACGCTGGTGCTGTGCTTGG 36408 Query 17545 ACCATCGCGCACCGTCGCTTGGCGAGTTCTCGACGCTAAATATTTCGGAGTCCCCCAACA 17604 ||| |||| | |||| ||||| || ||||| ||||||||||| | |||||| Sbjct 36407 ACCCCGGCGCGCAATCGCATGGCGGACCCTGGACGCCCAATATTTCGGACTGGCCCAACG 36348 Query 17605 GCGTAAGCGAGTGTTCGTTATTGCCAGCGCTCGACCAGACTTCGATCCCG 17654 || || ||||||||| | || || |||||| | |||||||||| Sbjct 36347 ACGCCGCCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGATCCCG 36298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154726611510592