Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq109454 331 3e-86 >seq109454 Length=55839 Score = 331 bits (366), Expect = 3e-86 Identities = 573/822 (70%), Gaps = 33/822 (4%) Strand=Plus/Minus Query 19197 CTGGCTAACTTCGTGCGCCGGGCATGGCAGATACTGGATCCAGGTATGCCGCTGGTGTGG 19256 ||||| |||||| | ||||| || |||| | || || || || ||| ||| Sbjct 27278 CTGGCCAACTTCATCCGCCGCGCGTGGCCCGTGCTTGAGCCTGGCCAGCCCTACGTGCAC 27219 Query 19257 GGGCCGCACATGGATGCGGTGTGCCTGCACCTGGAGGCCGTGACTAAGGGGCAGATCAAC 19316 || ||||||||| ||| | || |||||||||||| | || || ||||||| Sbjct 27218 GGCTGGCACATGGACGCGATCAGCGAACACCTGGAGGCCATCACAGCCGGCCAGATCACG 27159 Query 19317 CGCCTGCTGATAAACATcccccccGGCACATCCAAATCA---TCCCTGGTGTCGGTGTAC 19373 || ||||| || |||||||| || ||||| || || ||| || | |||| | Sbjct 27158 CGGCTGCTCATCAACATCCCGCCTGGCACGATGAAGTCCATGTCCACGG---CCGTGTTC 27102 Query 19374 TGGCCTGCTTGGGAGTGGGGTCCGAAGGGCATCCCCACCAACAGGGTGATCGGCGCATCC 19433 ||||| || ||||||||||| ||| || || || | | || | ||||||||||| Sbjct 27101 TGGCCGGCCTGGGAGTGGGGGCCGCGCGGTATGCCGTCGATGCGGTTCATCGGCGCATCG 27042 Query 19434 CACGAGCAAAGCCTGTCCGTTCGTGACTCGACCAAGATGCGGCGCCTGGTAACTGATCCG 19493 |||||| ||| |||| | | || ||| |||||||| || ||| | | | |||| Sbjct 27041 CACGAGGAAAACCTGGCGATCCGCGACAACGTGAAGATGCGCCGGCTGATC-CAG-TCCG 26984 Query 19494 --TGGTATCAGAAGCTGTGGCCAACCAACCTGATGCGGGACAACAAC--CAAAAGCTGAG 19549 ||||| ||| ||| ||||| ||||| || | | ||| | ||| ||| | || Sbjct 26983 ACTGGTACCAGGCGCTCTGGCCCACCAAGATGGCGGGCGACCAGAACGCCAAGACCTA-- 26926 Query 19550 CTTTGAGAACGAAAGTACCGGTTTCCGCCAGGCCTGTGCCGTCCGATCTATGACTGGTCG 19609 ||| || ||||| || || | || |||||||| | || || || ||||| || || Sbjct 26925 CTTCGAAAACGACCAGACTGGCTGGCGGCAGGCCTGCCCGGTGCGCTCAATGACCGGCCG 26866 Query 19610 CCGAGGCGACCGGGTTATTTGGGATGACCCACACAGCGCCGAGGATGCGCACAGCCCCGC 19669 || |||||||| || | ||||| ||||| ||||||| ||||| ||||||||| | Sbjct 26865 GCGCGGCGACCGCGTGCTGTGGGACGACCCGCACAGCGTGGAGGACGCGCACAGC---GA 26809 Query 19670 AGCCCTGATAGAGG---CGGAGCGGATATTCAAGGAGACGCTGCCGACACGACTGGTTAG 19726 ||| | | |||| || | ||||| ||| ||||||||||||||| || ||| | Sbjct 26808 GGCCGAGCTCGAGGGCGCGAACCGGATCTTCCGGGAGACGCTGCCGACCCGTCTGAACAA 26749 Query 19727 TCCTGAGCACTCCGCCATCGTCATCGTCATGCAACGCCTGAACGAGAATGACGTGTCAGG 19786 || | |||||| ||||||||||||||||| ||||||| || || || ||||| || Sbjct 26748 CCCGGCCAGCTCCGCGATCGTCATCGTCATGCAGCGCCTGAGCGTCAAGGATGTGTCGGG 26689 Query 19787 CATCATCCTGTCTGACGACTATGGCTATGAGCACCTGTGCTTGCCCATGGAGTACGAGCG 19846 | ||||| | || ||| |||||||||||||||||| ||||||||||||||||| Sbjct 26688 CGTCATCACGGGCGAGGACATGGGCTATGAGCACCTGTGCCTGCCCATGGAGTACGAG-- 26631 Query 19847 AGAAAGGCACTGCAAG---ACTTCGATCGGCTGGGAGGATTGGCGCAAGGAAGAGGGCGA 19903 ||| ||||| || ||||||| | ||| |||||||||| ||||||| Sbjct 26630 ----GGGCCGCGCAAGATCACCAGCATCGGCTTCGCCGATCCGCGCAAGGAAAAGGGCGA 26575 Query 19904 GTTACTATTCCCTGACCGGTTCCCGTCTCACGTTGTCGAGCGTGACAAGAAGCTTATGGG 19963 ||| || ||||| | || || ||| | || || ||||| ||||||||| | ||||| Sbjct 26574 GTTGCTGTTCCCGGCACGTTTTCCGCGCGAGGTCGTGGAGCGCGACAAGAAGATCATGGG 26515 Query 19964 CAGCC--ACGCCGTTGCGGGTCAGTTCCAGCAGCGACCGAGC 20003 ||| | ||||| ||||| |||||||||||||| || ||| Sbjct 26514 --GCCGTATGCCGTCGCGGGCCAGTTCCAGCAGCGCCCAAGC 26475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139057729813706