Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq50839 120 7e-23 seq41057 89.7 1e-13 >seq50839 Length=349 Score = 120 bits (132), Expect = 7e-23 Identities = 202/289 (70%), Gaps = 5/289 (2%) Strand=Plus/Minus Query 3663 GTTTTTGATGTGATCGGGCAGGACTACTGG---GGTGAAGGCGTAACAGCCAAACGTATC 3719 || || || ||||| || | ||||| ||| |||||||| || || ||||| || Sbjct 302 GTGTTCGACGTGATTGGCGAAGACTATTGGACCGGTGAAGGTGTGACGGCCAAGAAGATT 243 Query 3720 GCCGGTGCGCTTCGGGCGATGAATGGCGCCGACGTCACGGTCAATATTAACTCCCCTGGC 3779 |||| | | || | | || | ||||| || || |||| | || ||||| |||||| Sbjct 242 GCCGCCAAGTTGCGTGAGCTGGACGGCGCTGATGTTTCGGTTTACATCAACTCGCCTGGC 183 Query 3780 GGGGACATGTTCGAAGGCCTGGCCATCTACAACCTTCTGCGTGAATACGAAGGCCGTGTG 3839 || ||||||||||||||||||||||| |||||| | ||||| || ||| ||||| || Sbjct 182 GGTGACATGTTCGAAGGCCTGGCCATTTACAACTTGCTGCGCGAGTACAAAGGCGACGTA 123 Query 3840 ACTGTGAAGGTGCTCGGTATTGCCGCCAGCGCCGCCTCGGTCATTGCGATGGCCGGGGAT 3899 || |||| | || || || || ||||| || || || ||||| || ||| Sbjct 122 ACCACCAAGGCTATTGGCATGGCTGCATCTGCCGCGTCTGTGATCTACATGGCTGGTGAT 63 Query 3900 GAAATTCAGATCGG-CCGTGGTGCCTTCCTGATGATCCACAACTGCTGG 3947 | |||||| || ||| ||| || ||||||||||||||| |||| Sbjct 62 ACACGTCAGATTGGTTCGT-CTGCGTTTCTGATGATCCACAACGCCTGG 15 >seq41057 Length=259 Score = 89.7 bits (98), Expect = 1e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 2954 ATGGTTCTTGAGGGCGGGCTGAAATATCAGAACGTCACTATGAACCCGGAAGCAGCGCAG 3013 ||||| || |||||||| |||| || | |||| | || || |||| |||||| Sbjct 56 ATGGTGCTGGAGGGCGGCACCAAATGGGAGCAGATCACCTTCAATCCTGAAGACGCGCAG 115 Query 3014 ATGCTTGAGTCGCGGTCGTTCAGCATCGAGGAAATCTGCAGATGGTTCCGCGTACCGCCA 3073 ||||| || ||||| | ||| ||||||||||||| | | ||| |||||||||| Sbjct 116 ATGCTCGAATCGCGCGCCTTCTCGGTCGAGGAAATCTGTCGCTTCTTCGGCGTACCGCCC 175 Query 3074 TTTATGGTCGGCCACACATCGAAACAGAGCAGCTGGG 3110 || ||||||||||||||| ||| || ||||||| Sbjct 176 TTCATGGTCGGCCACACAGAGAAGACGACGAGCTGGG 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120023697713634