Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq53202 167 9e-37 seq108184 143 1e-29 seq107328 136 2e-27 seq81106 118 4e-22 seq107962 100 1e-16 >seq53202 Length=9363 Score = 167 bits (184), Expect = 9e-37 Identities = 237/336 (71%), Gaps = 18/336 (5%) Strand=Plus/Plus Query 9695 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCG 9754 ||||||||| || || ||||||||| |||||||||| || || ||| ||||||| ||| Sbjct 1814 CATGGCATCAGTGAATAAAGTCATCATCGTCGGCAACCTGGGGCGCGATCCGGAAATCCG 1873 Query 9755 CTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAA 9814 ||| | || ||||||||||| ||| ||||||| | | || || | |||| || Sbjct 1874 CTACATGCCCAGCGGCGACGCCATCGCCAACATTGCCGTGGCCACCTCGTTCCGTTCGAA 1933 Query 9815 GGACAAAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCGG 9874 ||||| || |||||| || ||| ||||| ||||||||| || | |||||||| Sbjct 1934 AGACAAGAACACCGGCGAGCAGAAGGAAACCACCGAATGGCACCGCATCTCGTTCTTCGG 1993 Query 9875 CCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGAGGG 9934 ||| || ||||||||||| | | || ||||| || || | ||||||||| | || || Sbjct 1994 CCGTCTGGCCGAGATCGTTGGCCAGTACCTGAAAAAAGGTTCGTCGGTCTACGTTGAAGG 2053 Query 9935 GCGCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGC---------TACAC 9985 || | | ||||| |||| | ||| | ||||| || ||| | Sbjct 2054 CCGTCTGCAGACGCGCAAGT---------ATACCGACAAGGATGGCGTCGAGAAGTACGC 2104 Query 9986 GACCGAGATCGTCGCCGACAAGATGCAGATGCTCGG 10021 |||||| || |||||||| || |||||||||||||| Sbjct 2105 GACCGACATTGTCGCCGAGAACATGCAGATGCTCGG 2140 >seq108184 Length=27730 Score = 143 bits (158), Expect = 1e-29 Identities = 313/466 (67%), Gaps = 2/466 (0%) Strand=Plus/Plus Query 54175 CTGGATTTGGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTT 54234 |||| | ||||| ||| | ||||| | |||||||| | | | ||| |||||| || Sbjct 19052 CTGGGTCTGGACTGACCCAGAGCGCACTGACCGGCTAGCCCGCATCTATAACGAGCGTTT 19111 Query 54235 CAACAACATCGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTCGCT 54294 |||||| ||||| |||||| ||| |||| || |||| || | | ||| Sbjct 19112 CAACAATATCGCGCCGCGCGCCTTCAACGGTGACCATCTGAACTTGGCCCACACATCGG- 19170 Query 54295 GCGCTTCGAC-CTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGCG 54353 |||||| || || | | |||||||||| | ||||||||| ||| || || Sbjct 19171 GCGCTTTCACGCTCTATGCGCACCAGAAGCGTGGCATCTGGCGGATCATCACGGCCGGTT 19230 Query 54354 ATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACCGGCA 54413 | || || ||||| || |||||||||||||||||| | |||||| |||| | || Sbjct 19231 CGACCTATCTGGCGCATGCGGTCGGCGCGGGCAAGACGATGACGATGGCTGCGAGCATCA 19290 Query 54414 TGGAGGAGCGCCGGCTGGGCCTGTCCAACAAGCCGATGTATGCGGTGCCGAACCACATGC 54473 |||| |||||||||| || ||| | |||| | ||| | ||||| || | Sbjct 19291 TGGAACAGCGCCGGCTCGGGCTGATCGCCAAGGCAATGCTCGTCGTGCCCGGTCATTGTC 19350 Query 54474 TCGCGCAGTTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGG 54533 | || ||| ||||||||| ||||| | ||| || ||| ||| ||| |||| |||| Sbjct 19351 TGGCACAGGCCGCGCGCGAATTCCTCGCGCTCTATCCGAACGCCCGCATTCTGGTGGCGG 19410 Query 54534 ACGAGCAGAATTTCCATACGCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAATA 54593 |||| ||| ||| | | |||| || || || | |||| || ||| | | Sbjct 19411 ACGAAACGAACTTCGCGAAGGACAAGCGGAAACGCTTTCTGGCGCGTGCGGCGACCGCCA 19470 Query 54594 ACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGCCGCATCGG 54639 | |||||||||||| |||||||| ||||||||| | |||||| Sbjct 19471 GCTGGGACGCGATCATTATCACGCATTCGGCGTTCCGATTCATCGG 19516 Score = 113 bits (124), Expect = 2e-20 Identities = 333/502 (66%), Gaps = 25/502 (5%) Strand=Plus/Plus Query 55716 AGATCGCGTTCATGCGCGACAACAAGGAGC---ACGCCAAGAAGGAGCGCCTGTTCGCGG 55772 ||||||| ||||||| || ||||| || |||||||| || || ||||||| | Sbjct 20587 AGATCGCCTTCATGCAGGATTACAAGAAGACGGACGCCAAGCAG---CGGCTGTTCGGCG 20643 Query 55773 ACATGCGCGAGGGCAAAAAGCGCATCCTGATCGGCGGCAAGGA---CATGGAAACCGGCG 55829 | | |||| ||||| || ||||||||||| || ||||| ||||||| Sbjct 20644 ATGTCCGCGCCGGCAAGGTTCGGTTCCTGATCGGCTCATCCGATACCATGGGCACCGGCG 20703 Query 55830 TGAACGTGCAGAAG--CGCCTCTACAGCGAGG-AGCATCTGGACGCGCCGTGGTTCCCGG 55886 | || |||| || ||||| | ||| | | ||||| || | ||||||||| || Sbjct 20704 TCAA--TGCACAACTTCGCCTGAAG-GCGCTGCACCATCTCGATGTGCCGTGGTTGCCCT 20760 Query 55887 CGTCCGTCGAGCAGCGCGAGGGGCGCATCATCCGCCAGGGCAACCAGAACAAGCAGGTGC 55946 || |||||||||||||||| |||||| | || ||||||||||| || | |||| Sbjct 20761 CGCAGATCGAGCAGCGCGAGGGCCGCATCGTGCGGCAGGGCAACCAACACGATGAGGTCG 20820 Query 55947 GCATCCGCGCGTGGGCGACGAAGGGC-AGCTACGACAGCACGATGTGGGGGATGAACGCC 56005 ||| ||| | ||||| ||||| ||| ||| ||| |||||| || |||| Sbjct 20821 ATATCTTCGCCTATGCGACCGAGGGCTCGCT-CGATGCCACCATGTGGCAGAACAACGAG 20879 Query 56006 CGCAAGGCGCGGTTCATCGAACAGGCCCTCAACGGCGACGACAGCG-TGCGCTCGCTCGA 56064 |||||||| || ||||||| || |||| ||| || || || | || | | || Sbjct 20880 CGCAAGGCCCGCTTCATCGCGGCCGCGCTCAGCGGTGA-TACCTCGATCCGGCGGTTGGA 20938 Query 56065 GGACGTGTCTGAAGCGTCGGC------GTTCGACATGGCCGCCGCGCTGGCGTCGGGCGA 56118 ||| || ||| | ||| ||||| ||||||| ||| | || ||||| || Sbjct 20939 AGACCTGGGTGAGGGCCAGGCGAACCAGTTCGCCATGGCCAAAGCGATAGCCTCGGGTGA 20998 Query 56119 CGAGCGCTATCTGAAGATGGCCGGCCTGAAGGCCGACGTCGAGCGCCTGGAGCGTCTGAG 56178 |||| | || ||| || || || ||||||| ||| || || || || || | Sbjct 20999 TCAGCGATTGATGCAGAAAGCTGGGCTCGAGGCCGATATCGCCCGGCTCGAACGCCTCCG 21058 Query 56179 CTACGCGCACCACGACGACCAG 56200 | ||| || || ||||||||| Sbjct 21059 CGCCGCCCATCAGGACGACCAG 21080 Score = 93.3 bits (102), Expect = 2e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 54863 CACGAGTTCCGCAAACTCGACTTCGCGACGCAGCAGGGCAACA-TCAAGGGCATCGACCC 54921 || |||||||| ||||| |||||| || || || | | || | ||||| |||| || Sbjct 19734 CAGGAGTTCCGTAAACTTAGCTTCGCCAC-CAACATGTCGACGCTGAAGGGTGTCGATCC 19792 Query 54922 GGCCGGCTCGCAACGCGCGATGGACCTGTTCATGAAGGCGCAGTACCTGCGCTCGAAGAA 54981 |||||||| ||||| |||||| | ||||| | | || | | ||||||| Sbjct 19793 CAATGGCTCGCAGCGCGCCTGGGACCTCTATGTGAAGTCCCGGTTCATCGAGACGAAGAA 19852 Query 54982 GCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGGGCGAGCT 55041 || ||||||||||| || ||| || || || || ||||| |||||| | |||||| | Sbjct 19853 CCCCGGCCGCGCGCTTGTGCTCGCTTCCGGAACACCCATCACCAACACGCTTGGCGAGAT 19912 Query 55042 GTTCACGGTGCAACG 55056 |||| ||||||| || Sbjct 19913 GTTCTCGGTGCAGCG 19927 >seq107328 Length=16160 Score = 136 bits (150), Expect = 2e-27 Identities = 230/330 (70%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 9695 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCG 9754 |||||| ||||||||||||||||||| ||||||| ||||| |||||| || ||| Sbjct 16082 CATGGCCAGCGTCAACAAAGTCATCCTCATCGGCAACCTCGGCCGCGACCCCGAGGTCCG 16023 Query 9755 CTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAA 9814 || ||| ||||||| ||| | || ||| |||| || || ||| || || Sbjct 16022 TTACAACCCCAGCGGCGGCGCCTGGTGCACGATCAGCCTGGCCACCACC---CGCAACTG 15966 Query 9815 GGACAAA-GCCAG--CGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTT 9871 | | || || || |||||| | | |||| |||||| ||||||||||| | ||| Sbjct 15965 GAAGAACCGCGAGACCGGCGAACGCCAGGAAGAGACCGAATGGCACCGCGTGGTTTTCAA 15906 Query 9872 CGGCCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGA 9931 || ||| | || || || | | ||| ||||| |||||| | |||||| |||| Sbjct 15905 CGACCGTTTGGCTGAAATTGCTGGCGAATACCTGAAGAAGGGCCGCCCCGTCTACGTCGA 15846 Query 9932 GGGGCGCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGA 9991 || ||| | || || || ||||||||||| | ||| |||| |||||| ||||| Sbjct 15845 AGGCCGCCTGAAGACCCGCAAGTGGCAGGACAAGGAAGGCAAGGACACCTACACCACCGA 15786 Query 9992 GATCGTCGCCGACAAGATGCAGATGCTCGG 10021 |||| | |||||| ||||||| |||| || Sbjct 15785 GATCATTGCCGACCAGATGCAACTGCTGGG 15756 >seq81106 Length=13242 Score = 118 bits (130), Expect = 4e-22 Identities = 167/231 (72%), Gaps = 9/231 (4%) Strand=Plus/Minus Query 3711 CGCGCCGCGCGTCGAGATACGCGGCAAGGTCGGCAAGGTGGACGCCCTTCGCGCACTTCT 3770 |||| || |||||| ||| ||| ||||||| ||||| || ||||| |||| |||| Sbjct 9797 CGCGGCGATCGTCGATGTACTTGGCCAGGTCGGTCAGGTGCACACCCTTGGCGCTTTTCT 9738 Query 3771 GCGAACGC---TCCATCCGCACGATCGGCAAGGTGATGTCGCCGTCGAGTACCTTCCGCT 3827 ||| | | || || |||||||| |||| |||| ||||| | |||| || Sbjct 9737 GCGTGCCCGAGTCGATGCGCACGATGGGCAGCTTGATCTCGCCCAGCACGGCCTTGCGGA 9678 Query 3828 GGAGCTTTTCGGGAGACAGGTGCGCGAAGTAGTCGCGGCACACCA-GATCG--AGGGGGA 3884 ||| ||| |||| ||||||| |||||||||||| ||||| | | | | ||||| Sbjct 9677 GGAACTTGTCGGTGCTGAGGTGCGAGAAGTAGTCGCG---CACCACGGTGGCCACGGGGA 9621 Query 3885 TGACGGCACGGCCGTCGTATTGGGCCATCAGGAGGAAAGCGGTGTTCATGG 3935 |||| || ||||| ||| |||||||| || ||||| ||||||||||||| Sbjct 9620 TGACCGCCATGCCGTTGTACTGGGCCATGAGCAGGAAGGCGGTGTTCATGG 9570 >seq107962 Length=16137 Score = 100 bits (110), Expect = 1e-16 Identities = 243/358 (68%), Gaps = 14/358 (4%) Strand=Plus/Minus Query 3162 CCGATGGTCAAGATCATCGCGTTCGCGATCTTCGCGACGCGGCGCCAGGAGGAGATCA-C 3220 |||||| || | | ||| ||| ||||||||| || ||||||||||||||||| | Sbjct 10006 CCGATGCGCATGCTGATCCTGTTTGCGATCTTCAGCACCAGGCGCCAGGAGGAGATCTGC 9947 Query 3221 GGCGATCCGCTGGGACGACCTGAACGAGGAGGAGAGCACGCAGCTC---GTGCGCGACGT 3277 || || | | |||||| || || || | ||||||| ||||||||| | Sbjct 9946 AACGTGACGG-GCGCCGACCTCGACCGGGCCAAGCG---GCAGCTCATGGTGCGCGACAT 9891 Query 3278 GAAGCACCCGCGCAAGAAGATCGGCAACGATCAG-GAATCGCGGCTCACGCCCGAGGCGC 3336 |||| | || || | ||| |||||||||| | | | | || || ||||||||||||| Sbjct 9890 GAAGAATCCAGGCGACAAGGTCGGCAACGACGTGCGGACCACG-CTGACGCCCGAGGCGC 9832 Query 3337 TGGCGATCATCAAGTCGATGCCGCGCACGCACGACCGCATCTTCCCGTAC-ACGACCGAC 3395 || | | ||| | | |||| || || | ||| ||||| |||||| |||| || Sbjct 9831 TGCAGCTGATCGACGCCCAGCCGGAAACCCAGGGCCGAATCTTTCCGTACAACGA--GAA 9774 Query 3396 G-CGATCAGCGCGCAGTTCACTCGCGCGTGCGACTGGCTCGAGATAGAGGACTTGCGGTT 3454 | || |||| || |||| | || || ||| | |||| || || ||| ||| || Sbjct 9773 GTCGGTCAGTACGTCGTTCTCGCGGGCCTGCAAGATCCTCGGCATCGATGACCTGCACTT 9714 Query 3455 TCACGACCTGCGCCGGGCCGGCGTGACGCGCCTATTCGAGATGGGCTGGAACATTCCC 3512 |||||| |||| | | ||| | | || || |||||| ||||||||| ||| ||| Sbjct 9713 CCACGACTTGCGGCACGAAGGCATCAGCCGGCTGTTCGAGCTGGGCTGGACCATCCCC 9656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201048756447993