Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq18243 113 9e-21 seq14912 109 1e-19 >seq18243 Length=2233 Score = 113 bits (124), Expect = 9e-21 Identities = 325/491 (66%), Gaps = 12/491 (2%) Strand=Plus/Plus Query 12707 TCGCCGCTGGCAGCGTCTTCCACCTCATTGAGCCGGATATTAACCAGGAGCTGTACGGCC 12766 ||| ||| ||| |||| | ||||||| ||||| || |||||| | | ||||||| Sbjct 36 TCGACGCGGGCGGCGTAGTTCACCTCAAACGTCCGGACATCAACCAGAACGTCTACGGCC 95 Query 12767 TGCCGGAATATCTCAGCGCGTTAAACTCTGCCTGGCTGAATGAAGCGGCCACGCTGTTTC 12826 | || ||||| || |||| | | || || | || || || || || || ||||| | Sbjct 96 TACCCGAATACCTTGGCGCCCTGCAGTCAGCGTTCCTCAACGAGGCCGCGACCCTGTTCC 155 Query 12827 GCCGCAAGTATTATCAGAACGGCGCACACGCAGGCTACATCCTGTATATGACCGACGCGG 12886 |||||||||| || | |||||| | |||| |||| |||||| | |||||| | | Sbjct 156 GCCGCAAGTACTACCTCAACGGCTCGCACGTCGGCTTTATCCTGCGCAGCACCGAC-CAG 214 Query 12887 CGCA-GAG-CAGCAGCGATATCGACCGGATGCGCCAGGC---GATGCGCGACACGAAAGG 12941 || ||| ||| | || |||| || | |||| ||||||||| || || Sbjct 215 AACATGAGCCAGGA-AGAGGTCGATGCCAT---CAAGGCGAAGATGCGCGAGGGCAAGGG 270 Query 12942 CCTGGGTAACTTCCGCAATCTGTTTATGTACGCGCCGAACGGCAAGCCGGACGGAATTAA 13001 | ||| |||||||| || || || || || | || ||| | | | || || | Sbjct 271 GCCGGGGAACTTCCGGAACCTCTTCATCCACTCACCAGGCGGGCATGAGAAGGGCATCCA 330 Query 13002 GATCCTGCCGCTCAGCGAGGTGGCGACGAAAGATGATTTCTTTAACATCAAAAAGGCCAG 13061 |||| | ||| |||||||| | || | || || || || | ||||| || || Sbjct 331 GATCATTCCGATCAGCGAGATCGCCGCCAAGGACGAGTTTGTCGGGATCAAGAACACCTC 390 Query 13062 CCGTGACGACCTGCTGAGCGCGCACCGCGTGCCGCCGCAAATGATGGGGATTATCCCGGA 13121 || |||||| | ||| |||||| || |||||||| || || |||| || | || | Sbjct 391 GCGCGACGACGTCCTGGCCGCGCATCGGGTGCCGCCCCAGCTGCTGGGCATCGTGCCCGC 450 Query 13122 CGGTGCAGGCGGCTTTGGCGAT-TCGGTGAAGGCGGCACAGGTGTTTGTCCGCAATGAGC 13180 | || |||||||| || ||| ||| | ||||| | ||||| | ||||| ||| Sbjct 451 CAACGCCGGCGGCTTCGGTGATGTCGAT-AAGGCCTCGGCCGTGTTCGAGCGCAACGAGA 509 Query 13181 TGACGCCGTTG 13191 | | ||||||| Sbjct 510 TCAAGCCGTTG 520 >seq14912 Length=899 Score = 109 bits (120), Expect = 1e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27250 TGCCGCCGCCAGTCCTGCACGGGTACGCTCAACAATCAGCTCGCGCTCCATTTCCGCCAG 27309 |||||| || || || || ||| ||||| || || || |||||||| ||||||| Sbjct 266 TGCCGCAGCAAGACCCGCCAAGGTCCGCTCGCGAACGAGGTCCCGCTCCATCTCCGCCAT 325 Query 27310 CGCCCCCATAACATGAAAAAAGAAGCGGCCCATTGGCGTACTGGTATCAATGCTGTCGGT 27369 ||| |||| ||||| || ||||| ||||| | || | || || |||| ||||| Sbjct 326 CGCGGCCATTACATGGAAGAAGAACCGGCCTGCAGCTGTGCCTGTGTCGATGCCATCGGT 385 Query 27370 CAGGCTGCGGAAGTTTATTCCTTTTTCGCGCAGTTCCTCAGTCAGCATAACCAGATGGCG 27429 ||||||| |||||| || | | | |||| ||| | || | |||| || || Sbjct 386 CAGGCTGGCGAAGTTGATCTCCCTCGCCCGCAACTCCGCTGTGAAGTCCACCAACTGTCG 445 Query 27430 CATGCTGCGGCCAAGACGATCCAGCTTCCACACCACCAGTGTGTCGCC 27477 || |||| ||||| |||||||||||||| || ||||| |||||||| Sbjct 446 CACCGTGCGCCCAAGCCGATCCAGCTTCCAGACAACCAGCGTGTCGCC 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94358433812412