Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq109268 89.7 5e-13 seq93114 82.4 7e-11 >seq109268 Length=27228 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39835 GGGATCAGCTTTTCTGGATGTTGATAAGGCCCAAAGTTATTGGAGCAGTTGGTTATCACA 39894 |||||||||||||| ||| || | || || |||| || |||||||||| ||||| Sbjct 17820 GGGATCAGCTTTTCAGGAAAATGGAACGGGCCGTAGTTGTTCGAGCAGTTGGAGATCACC 17761 Query 39895 ACAGGCAAATCGTAGGTGCGGTGCCAAGCTTTCACAAGATGGTCAGATGCTGCCTTAGAC 39954 || |||| | ||||||| |||||||| || || | |||||||| || || ||||| || Sbjct 17760 ACCGGCAGACCGTAGGTACGGTGCCAGGCGATCGCCAGATGGTCGGAGGCAGCCTTGGAG 17701 Query 39955 GC 39956 || Sbjct 17700 GC 17699 >seq93114 Length=153 Score = 82.4 bits (90), Expect = 7e-11 Identities = 97/128 (76%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 39283 CATCAATACCGATAAAGGGTAGTAGATCATGGGTTTGTCATACACAGGGAGCAATTGCTT 39342 ||||| || || || || || |||| ||| || || ||||||| || | ||||||||| Sbjct 152 CATCAGCACTGACAATGGATAATAGACCATCGGCTTATCATACAATGGCATCAATTGCTT 93 Query 39343 GCTCA-CAC-TGCGTGTTACCGGATGAAGGCGGGTTCCACTTCCTCCCGCCAAAATAATA 39400 ||||| ||| ||||| | |||||| | |||||| || |||||| || | |||||| Sbjct 92 GCTCATCACAAGCGTG--AGCGGATGTAAGCGGGTGCCTGATCCTCCGGCAAGAATAATT 35 Query 39401 CCTTTCAT 39408 |||||||| Sbjct 34 CCTTTCAT 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471973437836120