Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq110276 100 2e-15 seq51308 96.9 2e-14 >seq110276 Length=11845 Score = 100 bits (110), Expect = 2e-15 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || ||||| ||||| || || || |||||| | ||||| |||||||| || |||| Sbjct 3157 ATGCGGTCATTACGGTTCCTGCCTACTTCAATGATGCGCAACGACAAGCAACGAAGGATG 3098 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||||||||||| | || ||||| | || || ||||| ||||| || || | Sbjct 3097 CTGGTCAAATTGCAGGTCTTGACGTGTTACGCGTCATCAACGAACCGACAGCTGCAGCTC 3038 Query 474855 TTGCTTATGG 474864 | ||||| || Sbjct 3037 TCGCTTACGG 3028 >seq51308 Length=240 Score = 96.9 bits (106), Expect = 2e-14 Identities = 120/163 (74%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 474712 ATATCTT-GGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATT 474770 || |||| || || ||||||||||| || || ||||| || || || || ||||| ||| Sbjct 21 ATTTCTTAGGTCATGAAGTAACTGAAGCGGTTATTACCGTACCGGCTTACTTTAACGATG 80 Query 474771 CTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTA 474830 | ||||| || || |||||||| || || || || ||| | | ||| |||||||| Sbjct 81 CACAACGCCAGGCTACTAAAGAAGCCGGCGAGATCGCTGGTTTGACAGTTAAACGTATTA 140 Query 474831 TTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 |||| ||||| || || || || || ||||| ||| | || || Sbjct 141 TTAACGAACCTACTGCTGCTGCCCTGGCTTACGGTTTGGACAA 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3263409249562748