Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq109371 206 7e-49 seq109454 122 2e-23 seq81106 86.0 2e-12 >seq109371 Length=32687 Score = 206 bits (228), Expect = 7e-49 Identities = 549/820 (67%), Gaps = 83/820 (10%) Strand=Plus/Minus Query 472 ATCGAATGGACCGACGCCACGTTCAATCCGTGGATCGGCTGCACCAAAATCAGCCCGG-C 530 ||||| ||| | ||| ||||||||||||||||||||||||| | ||||||||| | Sbjct 6270 ATCGAGTGGGCTGACCACACGTTCAATCCGTGGATCGGCTGCGCGGCCGTCAGCCCGGAC 6211 Query 531 GTGTG--ACCACTGCTACGCCAGCGTGTCCACGCCCACGCGCCGGTTCGGC-GTGAAGTG 587 | || | ||||||||||| | | | | ||| ||| || |||| | || | Sbjct 6210 GGCTGCAAGAACTGCTACGCC---GCGGACTGGGCCAAGCG---GTACGGCCGCGACTTC 6157 Query 588 GGGCGCAGGCGAGGAACGCCGCCGCACCGCGCCTTCGAACTGGCAGCTGCCGCTGCGGTG 647 | ||||| | |||| || || || | | ||||||| ||||||||||| ||| Sbjct 6156 G--CGCAGC----GCACGC-GCACCAGCGAGGC---GAACTGGAAGCTGCCGCTGAAGTG 6107 Query 648 GAACGCGCAGCACGATCAGTTCTTCGCGGAGAACGGCCGGCGTCGCCGCGTGTTCTGCGC 707 |||||| ||| ||| | | ||| ||||| || |||||| |||||||| Sbjct 6106 GAACGCACAGGCCGAGC-----------GTGAA-GGCCGCCGCTTCCGCGTCTTCTGCGC 6059 Query 708 GAGCCTGGCCGACGTGTTCGACAACGAAGTGGACCCGTCG---TGGCGCGCCGACCTGTT 764 ||||| ||||||||||||||||| ||| |||||| |||||| | | || || Sbjct 6058 CTCGCTGGCTGACGTGTTCGACAACGAGGTG---CCGTCGGAGTGGCGCTCGCATCTCTT 6002 Query 765 CGCGTTGATCGAAGCCACGCCGAACCTGGACTGGCTGCTGCTGACCAAGCGCATCGGCAA 824 | |||||| ||| || ||| | ||||||||||| ||| |||| |||||||||||||| Sbjct 6001 CTGCCTGATCGCAGCGACACCGTATCTGGACTGGCTCCTGTTGACGAAGCGCATCGGCAA 5942 Query 825 CG---TGTCGAAGATGGCGCCCGCCTCCTGGGTTGGCGGCCCGGTCCAGCACGGCCCGGA 881 || | | | ||| || |||| ||| | ||||| ||||| | | Sbjct 5941 CGCTCGGCCCATGATCGCCGAGGCCT-CTGCG--------ACGGTCGAGCACTAC---AA 5894 Query 882 CCCGGCGAAC-ATCCATGG----CGGGTG-GCC---GGCTAACGTGTGGCTGGGCGCGAC 932 ||||| | | | || ||| ||| | ||| | | ||||| ||| | ||||| || Sbjct 5893 CCCGGGCATCAAGCCGTGGACGACGGCAGCGCCTTGGCCCAACGTTTGGATCGGCGCCAC 5834 Query 933 GATCTGCAACCAGGCCGAAGCCGACCGCGACATCCCGAAGCTGCTGGCCACGCGCGCGGC 992 || ||||||||| ||||||||||||||||||||||||||||||||| ||| ||| Sbjct 5833 AGTCGTCAACCAGGCAGAAGCCGACCGCGACATCCCGAAGCTGCTGGCCGCGCCGGCGCG 5774 Query 993 GGTCAAGTTCCTGTCGATGGAACCGCTGCTGGGTGAAGTGAAGCTGCGCTGGGA----TT 1048 || ||||||| ||||| |||||| |||| ||| | || |||| | || Sbjct 5773 CGTGCGGTTCCTGAGCATGGAGCCGCTGATGGGGCCTGTGGACCTCCGCTTCCACCTCTT 5714 Query 1049 GGGTGAGC-----GGTGGCCGGCCCCTGGGCGGCGGGCCGATGTGCAATCTGCGCGAGCC 1103 | |||| || | ||| | | ||| || | | || | || |||| Sbjct 5713 CAGCGAGCCCACGGGCAACTGGCGCACGCACGGAGG---CAAGCGCCAGATG---GAGCT 5660 Query 1104 GTGGAAAACGCCGGAGCCGGAACCGGCCCTGGATTGGGTGATCGTAGGTGGCGAAAGCGG 1163 | | || |||| |||| ||| | | | ||| | ||||| || ||||| ||||| Sbjct 5659 GCGCAA---GCCG--GCCGACGGCGG-CATTCACTGGATCATCGTCGGAGGCGAGAGCGG 5606 Query 1164 CCATGGCGCCAGGCCCATGAACCCTACGTGGGCGCGATTCCTGCGCGATCAGTGCGAAGC 1223 | |||||| | || ||| |||| | ||||| || ||||||||| ||||||| || Sbjct 5605 GCCTGGCGCGCGTCCGATGCACCCCAGCTGGGCCCGCGCCCTGCGCGACCAGTGCGCGGC 5546 Query 1224 CGCTGGCGTGCCTTTCCTGTTCAAGCAGTGGGGCGAATGG 1263 || ||||| | || | ||||||||||||||||| ||| Sbjct 5545 GGCCAGCGTGGCGTTTCACTTCAAGCAGTGGGGCGAGTGG 5506 >seq109454 Length=55839 Score = 122 bits (134), Expect = 2e-23 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 1132 CTGGATTGGGTGATCGTAGGTGGCGAAAGCGGCCATGGCGCCAGGCCCATGAACCCTACG 1191 ||| | ||||||||| || |||||||||||||| ||| |||| ||| ||| | Sbjct 47883 CTGCACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCC 47942 Query 1192 TGGGCGCGATTCCTGCGCGATCAGTGCGAAGCCGCTGGCGTGCCTTTCCTGTTCAAGCAG 1251 ||||| ||| ||||||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct 47943 TGGGCCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAA 48002 Query 1252 TGGGGCGAATGG 1263 |||||||| ||| Sbjct 48003 TGGGGCGAGTGG 48014 >seq81106 Length=13242 Score = 86.0 bits (94), Expect = 2e-12 Identities = 98/130 (75%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 1132 CTGGATTGGGTGATCGTAGGTGGCGAAAGCGGCC--ATGGCGCCAGGCCCATGAACCCTA 1189 || || ||||| ||| || ||||| ||||||| | ||||| | || ||| |||| Sbjct 8758 CTCGACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGC--GTCCGATGCACCCGG 8815 Query 1190 CGTGGGCGCGATTCCTGCGCGATCAGTGCGAAGCCGCTGGCGTGCCTTTCCTGTTCAAGC 1249 | ||||| ||| ||| ||||||||||||| ||||| ||||| ||| ||||||||| Sbjct 8816 CATGGGCCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGC 8875 Query 1250 AGTGGGGCGA 1259 ||||||| || Sbjct 8876 AGTGGGGTGA 8885 Score = 80.6 bits (88), Expect = 7e-11 Identities = 95/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 687 GCGTCGCCGCGTGTTCTGCGCGAGCCTGGCCGACGTGTTCGACAACGAAGTGGACCCGTC 746 ||| || ||||| |||||||| |||||||||||||| || ||||||| ||| || Sbjct 8283 GCGCCGGCGCGTCTTCTGCGCCAGCCTGGCCGACGTCTTTGACAACGCGGTGCCGCCCGA 8342 Query 747 GTGGCGCGCCGACCTGTTCGCGTTGATCGAAGCCACGCCGAACCTGGACTGGCTGCTGCT 806 ||||| ||| ||||||| | ||||| ||| || | | | || |||||||| || Sbjct 8343 ATGGCGACACGAGCTGTTCGAGATGATCCGGCTCACACCCACCATCGATTGGCTGCTACT 8402 Query 807 GACCAAGCG 815 |||||||| Sbjct 8403 CACCAAGCG 8411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137178614488850