Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq107653 183 4e-41 seq107883 87.8 2e-12 >seq107653 Length=176415 Score = 183 bits (202), Expect = 4e-41 Identities = 473/714 (66%), Gaps = 35/714 (5%) Strand=Plus/Plus Query 150018 CGAAAGGATTGCTGACCATGCCGTAACGAGTCTTGAAACCAATCTTTGGTTGGAAGGTAT 150077 |||| || || |||||||||||| || |||||||| || || || |||| || Sbjct 132464 CGAAGGGGTTCGCGACCATGCCGTAGCGGGTCTTGAAGCCGATGCGAGGACCGAAGTTAC 132523 Query 150078 CAGGATCGATAGAACGTACCATCTGGAGAGGTACATAGGGGCAGTAGAAGAGACCTGCAT 150137 | || | || ||| ||| ||||||||| || || ||||||||||||| || || | Sbjct 132524 CCGGCCACACAGCACGAACCTGCTGGAGAGGAACGTACGGGCAGTAGAAGATGCCGGCGT 132583 Query 150138 CATAAGGGGAAGTACCCTTATAACCGATA-ACATAGTAGTGCTTGTCGGAGAGGTTCGCT 150196 | ||||| | | |||||| || || | |||| ||||| | || || |||| Sbjct 132584 CGTAAGGCGTCGGACCCTTGTAGCCTACGCACAT-GTAGT---TTCCGCCGA---TCGCG 132636 Query 150197 GCATAAGGATCAACGTAGACCTTGATGCGACCGTTGATAGTACCTACGGAGAGGTTACCA 150256 || || || | ||||||||||||||||||||| | |||| || || ||| || Sbjct 132637 ---TAGGGGTCGATGTAGACCTTGATGCGACCGTTCAGGATACCCGCGAAGGTGTTGCCC 132693 Query 150257 GTGTCATCAACATCACCGATGGAAG--GACCACCAGCGCCAGTTAGACC-GCTGCTGTAG 150313 ||||| || || | ||| | | | |||| ||| | | | | |||| Sbjct 132694 GTGTCGTCGACCT-------GGAGGTTGTCACCCAG-----GTTCGGCATGGAGAGGTAG 132741 Query 150314 TCGAGAACTCCTGCCATTGCCAGTGCCGAAGCGACATCAGCAGAACAGATCAGGAAGTTG 150373 || | | || ||| ||||| || || || || | |||||||||| ||| Sbjct 132742 CCGGC-------GGCGTT--CAGAGCCGATGCCACGTCCGCCGTGCAGATCAGGATGTTA 132792 Query 150374 CCCTTTCCTCTACGAGTCTCTTGTGCGATTGCGTTAGCGTCACGCTCGATCTGGAAGAGA 150433 ||||| || | | ||||| | ||||| ||| || |||||||| ||||| Sbjct 132793 CCCTTGCCACGCCTCGTCTCCTTGGCGATCTGGTTGCACTCGCGCTCGATGTGGAAATAC 132852 Query 150434 AGTCCTTTGAATTTCTCAACAGACCATCTGCCGTTGGAGTCAACGTCGAGGTCGAAGATG 150493 || || ||||| |||||||| ||||| | |||||| ||||| ||||| |||||||||| | Sbjct 132853 AGACCCTTGAACTTCTCAACCGACCAGCGGCCGTTCGAGTCGACGTCCAGGTCGAAGAAG 132912 Query 150494 CCAGCGTTAGCAACGTTGTTTTGAGCACCTTTCTTTGCAACTGTGTAGACAGTACGGACG 150553 || | ||| | || | | || | || | ||| || || ||| ||||| || Sbjct 132913 CCCGGGTTGGTCGTGTCGATCTGCGATCCCTGCTTGGCGGAGGTCAGGACCGTACGAACC 132972 Query 150554 ACTTCACGGTTGATTTCTGCGAGAACTTCGCTAGAAAGGATGTTAGCAAGTTCTTGCTCT 150613 | || |||||||| || || || | ||| | | |||||||| | || || ||| Sbjct 132973 GCCTCGCGGTTGATCTCGGCCAGGATCTCGGTGGCGAGGATGTTCGAGAGCTCAGCCTCG 133032 Query 150614 GCATCCAGACCATGGATCGCCTTGAGGTCTTGTGCCAGTTCCAAGGTGTATTCTGCTTTG 150673 || || ||||| || | ||||| ||||| ||||||||||||| | ||| || || Sbjct 133033 GCGTCGAGACCGTGTACTGCCTTCAGGTCCTGTGCCAGTTCCATCGAGTACTCGGCGGCC 133092 Query 150674 AGTGCTCTGGACTTTGCAGTCACAGAAGTCTTCTCAATGCTGAATGACATCTCA 150727 || || | | ||| || || || | |||||| |||||||| | ||||||| Sbjct 133093 AGCGCGCGGCTCTTCGCCGTGACGGTGACCTTCTCGATGCTGAAGGCCATCTCA 133146 >seq107883 Length=54593 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCTACCGCTG 108577 |||||| |||||| |||||||||||||||| || ||||||||| || || ||||||||| Sbjct 44894 TGGGCGCTGAGGGGATCGAACCCCCGACCCGCTGCGTGTAAAGCAGCCGCTCTACCGCTG 44953 Query 108578 CGCTAATCGCCCTGGC 108593 ||||| |||||| || Sbjct 44954 AGCTAAGCGCCCTTGC 44969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632633008177080