Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq77333 100 1e-16 seq77334 91.5 7e-14 >seq77333 Length=160 Score = 100 bits (110), Expect = 1e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 |||||||||||| ||||| || || ||||| | ||| || || ||||||| ||||| Sbjct 1 CATTTCTTCTTTACCGTGGTTTTTACGCAGATCAAGGAATTCGAAGATATCTGCATGCCA 60 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 || |||||||| |||||||| |||||| | ||| || ||||| ||||| || || | Sbjct 61 AGGCTCTAAATAAATAGCAAAGGCACCTTTACGTTTGCCACCACCCTGATCAACATAACG 120 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGG 26130 ||||| || || || || || |||||| Sbjct 121 GGCAGTATCGTTAAACACGCGCAGCATTGG 150 >seq77334 Length=160 Score = 91.5 bits (100), Expect = 7e-14 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 |||||||||||| ||||| || || || ||||| || ||||||||||| | ||||| Sbjct 1 CATTTCTTCTTTACCGTGGTTTTTACGCAGGTCTAAAAATTCAAAAATATCGGCATGCCA 60 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 ||| || | || |||||||| ||||| | || || ||||| |||||||| || | Sbjct 61 TGGCTCCAGGTAAATAGCAAAGGCGCCTTTACGCTTGCCACCACCCTGATCTACATAACG 120 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGG 26130 || || ||||| || || || |||||| Sbjct 121 GGCGGTATCATTAAACACGCGCAGCATTGG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252697064456075