Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020844.1 Length=40695 Score E Sequences producing significant alignments: (Bits) Value seq109454 178 3e-40 >seq109454 Length=55839 Score = 178 bits (196), Expect = 3e-40 Identities = 158/198 (80%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 2409 GTCGTAGTAATACTTGGGCGACTTGGACAGCAGGAAGATGTACTCGTGCGCCTTTGTGCA 2468 ||||||| | |||| |||||| |||||||| || || | |||||||||||| ||||| Sbjct 34527 GTCGTAGAAGTACTGCTCCGACTTCGACAGCAGAAATATCTGCTCGTGCGCCTTGGTGCA 34586 Query 2469 GCGGTCGCGCACGCTCTCCGGCATTGGGTTTGGCTTGTGCCAGATAATATCCTGACGCAG 2528 |||||||||| ||||||| ||||| ||||| |||||||||||||| || |||||||| || Sbjct 34587 GCGGTCGCGCGCGCTCTCTGGCATCGGGTTGGGCTTGTGCCAGATGATTTCCTGACGGAG 34646 Query 2529 GTACCAGCCGTCGGCTTGCAGGGCGAACGCTACGCGCCAGGGGATGCCGATAAGGTCTTT 2588 |||| || ||| | ||||| ||||| || ||||||||||| ||| || | |||||| Sbjct 34647 CCACCAACCATCGTCCTGCAGCGCGAAGGCCACGCGCCAGGGCTGGCCCATCATGTCTTT 34706 Query 2589 TGCTTTCAATCCGTTAGG 2606 | ||||| || || || Sbjct 34707 CGGCTTCAAGCCTTTCGG 34724 Score = 87.8 bits (96), Expect = 5e-13 Identities = 115/155 (74%), Gaps = 6/155 (4%) Strand=Plus/Plus Query 2137 GTTCCGCTGCCGCCGAACGGGTCCAGGACTGTGCCGTTTTCCGGGCACCCAGCCAG-GAT 2195 || |||||||||||||| || ||||| || |||||| |||||| || ||| | ||| Sbjct 34066 GTGCCGCTGCCGCCGAAGGGATCCAGCACGGTGCCGCCGGGCGGGCAGCC-GCCGGTGAT 34124 Query 2196 GCACGGCTCAATCAGATCTGGCGGGAAGGTAGCGAAGTGGGCGCCCTTGTAGGGTCGGCT 2255 ||| || | ||| |||||||||||||| |||||||| | || ||| |||| | Sbjct 34125 GCATCGCGCGGCCAGTTCTGGCGGGAAGGTGGCGAAGTGCGAACCTTTGAAGGGATG--C 34182 Query 2256 GTTG--ACGGTCCAGACGCTGCGGCGGTTGCGGGT 2288 |||| | |||||||| ||||| ||||||| || Sbjct 34183 GTTGGAATCGTCCAGACACTGCGAGGGTTGCGCGT 34217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129930598235834