Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq109776 91.5 2e-13 seq49190 91.5 2e-13 >seq109776 Length=48066 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 || || || |||||||| | || ||||| || ||||| |||||||||||||| || Sbjct 4069 TCGTTTGCTGAGCGCCTCATCGCTTTTGCTGCGGTTGAGGGGATCTTCTTCTCCGGTTCT 4010 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| || |||| |||| |||||||||| ||||||||||| ||| | || || ||| Sbjct 4009 TTCGCGGCCATTTTTTGGCTGAAGAAGCGCGGTCTCATGCCCGGCTTGACATTTTCCAAT 3950 Query 65188 GAACTTATTTCCCGAGATGAGGG 65210 || || || |||||| || || Sbjct 3949 GAGCTCATCAGCCGAGACGAAGG 3927 >seq49190 Length=333 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/274 (68%), Gaps = 3/274 (1%) Strand=Plus/Plus Query 75522 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGG 75581 |||||||||| || ||||| ||||| ||||| | || || ||||||||| |||| | | Sbjct 47 ATGGTATTATCCCTATGCTGCGCGTGTTTAATGATACCGCCCGCTATGTAGATCAGGGTG 106 Query 75582 GGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGG 75638 | || || || || || | || | ||||| || || ||||||||||||||| | | Sbjct 107 GTGGTAAGCGTAAAGGTGCCTTTGCTATTTACTTAGAGCCTTGGCATGCCGATATCTTCG 166 Query 75639 AGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTT 75698 | |||||||| | || ||||| ||| | ||||| || | ||| | |||| Sbjct 167 AATTCCTTGACCTGCGTAAAAACCACGGTAAGGAAGAAATGCGTGCCCGCGATTTGTTTT 226 Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758 || | ||| | | ||| | || ||| | || ||||||| || | ||| | Sbjct 227 ACGCCTTATGGGTGTCCGACTTATTTATGCAACGCGTTGAGGCTAATGAGGACTGGAGCC 286 Query 75759 TTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA 75792 ||||||| || || | |||||||| || |||| Sbjct 287 TTTTCTGCCCGCACGAAGCACCAGGCCTGGCCGA 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595740360798880