Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq107653 279 6e-70 >seq107653 Length=176415 Score = 279 bits (308), Expect = 6e-70 Identities = 539/785 (69%), Gaps = 23/785 (3%) Strand=Plus/Minus Query 115690 CTCTAACACGGCATTCCGTGAGATGGGTTTCTCGATCGAGAAGGTTACTGTAACAGCAAA 115749 ||| ||||| || | | |||||||| ||| ||||||||||| || || || || || Sbjct 133164 CTCGAACACTGCTTGGCCTGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAA 133105 Query 115750 GGCACGTGCCCTGAAGGCAGAGTACAGCCTTGAGCTTGCTCAGGACCTGAAGGCGATTCA 115809 | || || ||| || |||||| | || || || |||||||||||||| | || Sbjct 133104 GAGCCGCGCGCTGGCCGCCGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACA 133045 Query 115810 CGGTCTGGATGCTGAAACTGAACTGTCCAACATCCTCAGCACAGAGATTCTTGCTGAAAT 115869 |||||| || || || |||| || || ||||||||| ||| ||||| || || || || Sbjct 133044 CGGTCTCGACGCCGAGGCTGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGAT 132985 Query 115870 CAACCGTGAAGTTGTTCGTACCGTCTACACCAACGCTGTTGCTGGTGCTCAGAACAACAC 115929 |||||| || | |||||||| ||| ||| ||| || | |||| | |||| Sbjct 132984 CAACCGCGAGGCGGTTCGTACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACAC 132925 Query 115930 CGCAACTGCTGGTGTCTTCGACCTCGACGTTGACTCCAACGGTCGCTGGTCTGTTGAGAA 115989 | | | || |||||||||| ||||| ||||| ||||| |||||||| |||||||| Sbjct 132924 GACCAACCCGGGCTTCTTCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAA 132865 Query 115990 GTTCAAGGGTCTCCTGTTCCAGATCGAAAGAGA-TGCTAACGCTATCGGTCAGCAAACTC 116048 |||||||||||| ||||| ||||| | || ||| ||| |||| || | || Sbjct 132864 GTTCAAGGGTCTGTATTTCCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGA 132806 Query 116049 GTCGCGGGAAGGGCAACATCCTGATCTGTTCTGCTGACGTTGCTTCTGCACTGGGCATGG 116108 | || || ||||| |||||||||||||| | || ||||| || || || ||| | | Sbjct 132805 GGCGTGGCAAGGGTAACATCCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCG 132746 Query 116109 CTGGTGTTCTCGACTACACCCCCGCTCTCGCAGGTAACAACGGTCTCGCAGGCGTTGACG 116168 | || || || || || || ||| ||||| ||| ||| || |||| Sbjct 132745 CCGGCTACCT---CTCCATGCCGAACCT---GGGTGACAAC---CTC-CAG--GTCGACG 132698 Query 116169 ACACCTCCAGCACCCTGGTTGGTACTCTCAACGGCAAGATCAAGGTCTATGTTGATCCCT 116228 |||| || |||| | | |||| || ||||| ||||||||||| | || |||| Sbjct 132697 ACACGGGCAACACCTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCT 132638 Query 116229 ACTCTGCAAACATTGCTGATAAGCACTTCTACGTTGCAGGTTATAAGGGCACCAGCGCAT 116288 || || | | || || || || | | ||| ||| || ||||| | | | | Sbjct 132637 AC---GCGATC--GGCGGA-AACTACATGTGCGT---AGGCTACAAGGGTCCGACGCCTT 132587 Query 116289 ATGACGCAGGTCTGTTCTACTGCCCCTACGTTCCTCTTCAGCAGGTTCGTGCAATCAACC 116348 | ||||| || | ||||||||||| ||||||||||| |||||||||||||| | | Sbjct 132586 ACGACGCCGGCATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGC 132527 Query 116349 CCAACACCTTCCAGCCCAAGATCGGATTCAAGACTCGCTACGGCATGGTCTCGAACCCCT 116408 | | |||| || ||||| |||||||| ||||||||||||||| ||||||||| Sbjct 132526 CGGGTAACTTCGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCT 132467 Query 116409 TCGCACAAGGTCTGACCCAAGGTTCTGGCGCTCTGACTGCAAACAGCAACCGCTACTACC 116468 ||||||| || |||||| ||| | || || | | |||||||| ||||||| Sbjct 132466 TCGCACAGGGACTGACCGCCGGTGCAGGAGCCATCGTAAAAGACAGCAACGTCTACTACA 132407 Query 116469 GTCGC 116473 | ||| Sbjct 132406 GGCGC 132402 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 115328 TTCGACCCTGTACTGATCAGCCTGATCCGTCGCTCCATGCCTCAACTGATCGCTTACGAT 115387 |||||||| | ||||||| |||| || | ||||||||||| | ||||| || ||||| Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 115388 ATCGCAGGCGTTCAACCCATGACTGGTCCTACTGGACTGATCTTCGCAATGCG 115440 ||| || || || |||||||| ||||| || || ||||||||||| || || Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCG 133378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560467858264400