Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq108213 167 8e-37 seq56696 150 6e-32 seq37734 145 2e-30 seq108967 118 3e-22 seq57003 86.0 2e-12 seq2779 82.4 2e-11 >seq108213 Length=2622 Score = 167 bits (184), Expect = 8e-37 Identities = 268/380 (71%), Gaps = 14/380 (4%) Strand=Plus/Minus Query 40371 TCCAGCACGCGGGCTGCGTCCTTCATCGCG---TTGCGCGCCTTGATCCGTCCGTACGTC 40427 || ||||||||| | |||| |||||| ||| |||| ||| ||| | || Sbjct 1850 TCGAGCACGCGGCCGACGTCGCGGATCGCGCCCTTGGCCGCC---ATCGTACCGAAGGTG 1794 Query 40428 GCGATCTGCGCGACCTTGTCGGCCCCGTACT--TCCGGGTGACGTACTGGATCACCTCGC 40485 |||||||||| |||| ||| |||||| ||| | |||| ||||||||| | Sbjct 1793 GCGATCTGCGAGACCGCGTCCTTGCCGTACAAATCCT--TCACGTGCTGGATCACGCGGT 1736 Query 40486 CACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTT 40543 | || | || | || |||||||||||||| |||||||| |||||||| ||||| || Sbjct 1735 CGCGCCCTTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACGCGTTCGGGATT 1678 Query 40544 CAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGAC 40603 ||||| |||||||| | || || || ||||| ||||||||||||||| || Sbjct 1677 GAGGAAGCGCTCGAACAGCAGATTGTACTGGAGCGGATCGAGGTCGGTGATCAGCAGCGA 1618 Query 40604 GTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTC 40663 |||||| |||||||||||||| | || || || || || || ||| || || ||||| Sbjct 1617 GTAGGCCACCAGCGAACCGGCGCCCGAACCACGGCCCGGCCCCACCGGCACACCATTCTC 1558 Query 40664 CTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGAT 40723 ||| ||||| |||||| || || |||| |||||||| ||||| ||| | Sbjct 1557 CTTGGCCCACTTGATGAATTCGGCCACGATCAGGAAGTAGCCGGGGAATTTCATATTACA 1498 Query 40724 GATCATGTCGATCTCGTACT 40743 |||| ||||| ||||| ||| Sbjct 1497 GATCGTGTCGGTCTCGAACT 1478 >seq56696 Length=1533 Score = 150 bits (166), Expect = 6e-32 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 40520 GGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGG 40579 |||||||||||| ||||| |||||||||||||| ||||| | | || || |||||| Sbjct 1533 GGGCATGGACACCCGCTCCGGGTTCAGGAACCGTTCGAACAGCAACTTGTACTGCAGCGG 1474 Query 40580 GTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCC 40639 ||| |||||||| ||| || | || || |||||||||||||| ||||||| || || Sbjct 1473 GTCCAGGTCGGTAATCTTCAGCGCATAAGCCACCAGCGAACCGGCACCAGAGCCCCGGCC 1414 Query 40640 AGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAA 40699 || || ||| | ||| || ||| |||||| |||||||||| | |||| | ||| Sbjct 1413 TGGCCCCACCGGGCAGCCATTGAGCTTGGCCCAGTTGATGAAGTCCCCCACGATCAAGAA 1354 Query 40700 GTACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTACTGGAGCTGCT 40752 ||| |||||||||||||| | ||| || ||||||| | | ||| ||| Sbjct 1353 GTAGCCCGGGAAGCCCATCTTCAGGATGGTGGTGATCTCGAATTCCAGCCGCT 1301 >seq37734 Length=186 Score = 145 bits (160), Expect = 2e-30 Identities = 142/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 40520 GGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGG 40579 |||||||||||| ||||| ||||||||||| ||||| || | || || |||||| Sbjct 1 GGGCATGGACACCCGCTCCGGGTTCAGGAAGCGCTCAAACAGCAGGTTGTAGCGCAGCGG 60 Query 40580 GTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCC 40639 ||| ||||| |||||| || | |||||||||||||| ||||| | ||||| || || Sbjct 61 GTCCAGGTCCGTGATCAGCAGCGCATAGGCGACCAGCGAGCCGGCACCGGAGCCCCGGCC 120 Query 40640 AGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAA 40699 |||||||| | |||||| |||| ||||||||||||||||||| |||| ||||| Sbjct 121 CGGGCCGACAGGGCAGCCGTTTGCCTTGGCCCAGCGGATGAAGTCCGACACGATCAGGAA 180 Query 40700 GTA 40702 ||| Sbjct 181 GTA 183 >seq108967 Length=4619 Score = 118 bits (130), Expect = 3e-22 Identities = 235/344 (68%), Gaps = 8/344 (2%) Strand=Plus/Plus Query 40363 AGGGCTTGTCCAGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGT 40422 ||||| | | || |||||| | |||| || | || |||||||| || | |||| Sbjct 4279 AGGGCATCTGCAAAACGCGGCCGACGTCGCGCAGCACGGCGCGCGCCTGGAGCGTTCCGA 4338 Query 40423 ACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTT--CCGGGTGACGTACTGGATCAC 40480 | || ||||||||| |||| ||| || || || || || ||||| | || || Sbjct 4339 AAGTAATGATCTGCGCAACCTGATCGCGGCCATATTTTTCCTGG--ACGTAGCGAATAAC 4396 Query 40481 CTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCG 40538 |||| | || || || | || ||| ||||| |||| ||| ||||| ||||||||||| Sbjct 4397 CTCGTCGCGCCGGTCCTGGCA--GAAATCGATATCGAAATCCGGCATCGACACGCGCTCC 4454 Query 40539 GGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCG 40598 ||||||||||| |||||||| | || | | ||||| || || |||||||| Sbjct 4455 GGGTTCAGGAAGCGCTCGAACAGAAGCGCAAACCGGAGCGGATCCAGATCGGTGATGGTC 4514 Query 40599 AGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCG 40658 || | |||| | | ||| || || | || || || || || || || | |||| Sbjct 4515 AGCGCCCAGGCCGCGACCGAGCCCGCACCCGACCCACGTCCCGGTCCAACAGGAATGCCG 4574 Query 40659 TTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTA 40702 | |||||||||| ||||||||||| |||| |||||||| Sbjct 4575 CGCGCCTTCGCCCATTTGATGAAGTCCGACACGATCAGGAAGTA 4618 Score = 80.6 bits (88), Expect = 9e-11 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 39559 TCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGA 39618 |||||||||||||||| || || || || ||||||| ||||| | || || | || || Sbjct 3520 TCTTCTTGCCCATCGCGCGCCGGAGAAGATCGGCCTCGCCGAGCGAATAGCCCGACAGGA 3579 Query 39619 CCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGATGA 39657 |||||||| || | |||||| ||||| |||| ||||| Sbjct 3580 TCTGCGCAATCTGCATCACCTGTTCCTGATAGACGATGA 3618 >seq57003 Length=10244 Score = 86.0 bits (94), Expect = 2e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 39361 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39420 ||||||| | ||| ||||||||||||||||||||| |||||| | || | || || | Sbjct 92 ACTCGGCCGTGTAATGCGTCTTCAGCCACGCCGTGTGGTACGACAGCAGCGCATAGGCTG 33 Query 39421 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCG 39452 | | ||||| |||||||||| ||||||| ||| Sbjct 32 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCG 1 >seq2779 Length=230 Score = 82.4 bits (90), Expect = 2e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 39523 GGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAA 39582 |||| ||| || | || ||||| |||||| ||||||||| ||||| || ||||| | Sbjct 91 GGAACTTCTCGCGGTGCTCGGCCATTTCCTCGGCCTTCTTCTTACCCATGGCGCGGCGCA 150 Query 39583 GCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCT 39642 || ||| || ||||| | ||| ||| ||| || |||||| || | |||||||| Sbjct 151 ACATGTCCGCGCCGCCGAGCGAGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGCT 210 Query 39643 CCTGGTAGATGATGA 39657 ||||||||| |||| Sbjct 211 CCTGGTAGACCATGA 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163668388175468