Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021301.1 Length=56279 Score E Sequences producing significant alignments: (Bits) Value seq109371 210 8e-50 seq69633 95.1 4e-15 >seq109371 Length=32687 Score = 210 bits (232), Expect = 8e-50 Identities = 650/984 (66%), Gaps = 39/984 (4%) Strand=Plus/Plus Query 43242 CAACAACGACTGCGTGCCCGAAACCGAGTCCATGGG---CGACAGCTCGGTGGACCTGAT 43298 |||| |||||||||||| || ||| | ||||| ||||||| || | |||| | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGC---GTCGGCCTGGT 22972 Query 43299 TGTCACCAGCATTCCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGG 43358 | |||||||| || ||| || || ||||||||| |||||| || | ||||||||| Sbjct 22973 CCTGACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGG 23032 Query 43359 CCACACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCT 43418 |||||||| ||||| ||| |||| ||||||||||||||| ||| ||||||| Sbjct 23033 GCACACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCT 23092 Query 43419 GCGCATCCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTT---GTT 43475 |||| | || ||| ||| | | || |||||||||| |||||||| | | Sbjct 23093 GCGCGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAG 23152 Query 43476 CGGAAACGTCACCGGCGCCGGCGTGCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTT 43535 ||| | ||| |||| ||| | | || | || ||||||| || || || | Sbjct 23153 CGGCATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGC 23212 Query 43536 CCACGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGT 43595 | | ||| ||||||||| ||||| ||||| | || | |||| || ||||| Sbjct 23213 CTGCTTTCGCCGGCACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGACGTGGT 23272 Query 43596 GCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAA 43655 ||||| ||||||||||| ||| ||||||||||| ||||| ||||| |||| | | Sbjct 23273 CCGGGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAGCCG 23332 Query 43656 GATGGGTGTCGGCTCCCCGGAATACGTTCTGCTGTTCCACAAACCGCAAACAGACAGGTC 43715 ||||| ||||| || ||| | ||||| |||| ||| ||| || ||| | | Sbjct 23333 CATGGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGAC-GCTA 23391 Query 43716 GAAG-GGATACGCCGACACACCCGTCACCAAATCCAAGGACGAATACACCCGTGCCCGTT 43774 | | || || |||||| ||| ||| ||| ||||| ||| ||| |||| | || | Sbjct 23392 GCCGTGGCTATGCCGACCTACCGGTCTTCAAGGACAAGGCCGAGTACTCCCGCCCGCGCT 23451 Query 43775 GGCAGGTGGACGCGCACGCGTT---CTGGCGATCGAGCGGAAACAGGACACTGACAGCCG 43831 ||||| | || || |||| || | | | ||| ||| | | ||||| ||| Sbjct 23452 GGCAGCTCGATGCCCACGGCTTTGCCCGCAGCTCGGGCG---ATCGCTTGCTGACGCCCG 23508 Query 43832 ACGAGCTCGCCGCGCTG--CCAC-CAGACCAGTTGGCCTCACTGTTCACCAAGCACAGCC 43888 | || |||| || |||| |||| | ||| || | ||||| ||||||| | Sbjct 23509 AGGAACTCGACGGGCTGACCCACGCGGACATCTT---CAAGATGTTCCGCAAGCACTCCA 23565 Query 43889 TGAAGGACGTCTACGACTACCAGTCAC-ACGTCCGCATCGGTGAG--CAACTCGAAGGTC 43945 || | || ||||||| | || ||| |||| |||||||||||| | || || | Sbjct 23566 TGGAACGGGTGTACGACTTCGAG-CACGACGTGCGCATCGGTGAGGCCTTGGCGCAG--C 23622 Query 43946 GCGGTGCCCTGCCTGCCACGTTCATG--GCCATCGCCCCGGGATCGTGGTCACCTC-ACG 44002 |||| ||||| | || |||||| || ||| | | || ||| |||| | ||| Sbjct 23623 GCGGGATGCTGCCGACGACCTTCATGCTGCTGCAGCCGCAG--TCCTGG-CACCCCGACG 23679 Query 44003 TGTGGCACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAACGTCC 44062 | ||| |||| | | || ||| |||| | ||||| | ||| ||||| | | Sbjct 23680 TCTGGACCGACATCACGCGCATGCGCACCCTCAACGGTGCCCAG-TCGGCCGC-GGGCCG 23737 Query 44063 AAA--TGCACGTGTGCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTC 44120 | | |||| ||||||| ||||||||||||||| || || |||| | | | ||| Sbjct 23738 AGACCAGCACCTGTGCCCGATGCAGTTCGACATCGCCGATCGCGCGATCGCCCAGTACTC 23797 Query 44121 GAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGC 44180 | || ||| ||| | ||||| |||||||||||| || ||||| | || || Sbjct 23798 CATGAAGGGTGAGGAGGTCTATGACCCCTTCGGCGGGCTGATGACGGTGCCTTACCGCGC 23857 Query 44181 TCTGAAACTTGGTCGCCGCGGCCG 44204 || || || |||||||| || Sbjct 23858 CGTGCTGCTGGGGCGCCGCGGACG 23881 Score = 95.1 bits (104), Expect = 4e-15 Identities = 180/261 (69%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 41946 GGCGATCTTCGCGGCGTTTGGTCTGGGAAAGACGGTGATGCAGTTGGAGATCGTGCGCCT 42005 |||| | ||| ||| || || ||||| |||||| | |||| ||||||||||||| | Sbjct 21584 GGCGCTGTTCATGGCCTTCGGCCTGGGCAAGACGTTCGTGCAACTGGAGATCGTGCGGAT 21643 Query 42006 -GTCCCTGGCGAAGCACGGCGGCGGTAAAGGTCTGATCGTGATGCCGCTGGGTGTGCGGA 42064 |||| ||| || | ||| || | || |||||||| || || ||| || || Sbjct 21644 CGTCC---GCGC-GCGCATCGGTGGCATGGGCCTGATCGTCATCCCACTGTCGGTCCGCC 21699 Query 42065 TCGAGTTCGCCCACGACGCCGACATGCTGGGCATTGAAACCCGGTTCGTTCGCCGCACAG 42124 ||||||| | |||||| | | ||||||||| | | |||| | ||| || | Sbjct 21700 AGGAGTTCGTGCGCGACGCGGCGAAGCTGGGCATCAAGGTCAAGTTCATCCGCACCATCG 21759 Query 42125 AAGAAGTCGGCGGC---GATGGAATCTATCTCACCAACTATGAGAGTGTCCGCGACGGCA 42181 | || | | || | | || ||||| ||||||||||| ||| || || ||||||| Sbjct 21760 ACGAGGCTGACGACCCCGCGGGCATCTACCTCACCAACTACGAGTCGGTGCGGGACGGCA 21819 Query 42182 AGCTGGACCCGACACTGTTCA 42202 |||||||||||| ||||||| Sbjct 21820 AGCTGGACCCGATGCTGTTCA 21840 >seq69633 Length=120 Score = 95.1 bits (104), Expect = 4e-15 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 43365 CGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCAT 43424 ||| || |||| ||||||||||| ||||||||| | ||| | ||||||||||||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 43425 CCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGA 43479 || ||||| || || ||| ||| ||| || ||||| |||||| || |||| Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTGCCCGGA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179733545893242